RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SMIM8Q96KF7 97 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 PBOV1Q9GZY1 135 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 DSCAMO60469 2012 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 DEFB108AA8MXU0 73 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 P2RY10O00398 339 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 XRCC2O43543 280 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 ATG12O94817 140 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CGAP01215 116 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 AMY2AP04746 511 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 DBHP09172 617 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 BDKRB2P30411 391 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 HRH1P35367 487 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 LUMP51884 338 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 LSM6P62312 80 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 FGL1Q08830 312 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 ANKRD55Q3KP44 614 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 DRAM2Q6UX65 266 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 PUSL1Q8N0Z8 303 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 PNLDC1Q8NA58 520 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 POC1AQ8NBT0 407 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CSNK2A3Q8NEV1 391 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR1M1Q8NGA1 313 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR1S2Q8NGQ3 325 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR10R2Q8NGX6 335 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 MRPL24Q96A35 216 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 AQP10Q96PS8 301 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 ADAT1Q9BUB4 502 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 RTL8AQ9BWD3 113 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 ARV1Q9H2C2 271 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 STARD10Q9Y365 291 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 hCG_1809904A0A1W2PP81 198 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 A0A1W2PPE2 198 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 A0A1W2PR64 198 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 A0A1W2PRV1 198 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM218A2RU14 115 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 ADAM20O43506 726 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CDNFQ49AH0 187 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CYB5R2Q6BCY4 276 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 MOGAT3Q86VF5 341 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 C1orf174Q8IYL3 243 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CLRN3Q8NCR9 226 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR13C3Q8NGS6 347 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR2AE1Q8NHA4 323 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF418Q8TF45 676 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CCDC107Q8WV48 283 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 NUDCD2Q8WVJ2 157 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 SLC5A7Q9GZV3 580 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 C11orf1Q9H5F2 150 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CLN8Q9UBY8 286 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 NXPH2O95156 264 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 HLA-AP01891 365 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 RLN1P04808 185 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 GNB3P16520 340 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 COX5AP20674 150 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM244Q5VVB8 128 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM268Q5VZI3 342 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 RAB12Q6IQ22 244 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 MED12LQ86YW9 2145 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 TGIF2LYQ8IUE0 185 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 ACBD4Q8NC06 268 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 KLF14Q8TD94 323 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 NINJ1Q92982 152 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 NABP1Q96AH0 204 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 FGGYQ96C11 551 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 PRRT1Q99946 306 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 TM2D1Q9BX74 207 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 MRPL37Q9BZE1 423 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 V9GYS6 101 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 LRP5LA4QPB2 252 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 CD5P06127 495 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 CD34P28906 385 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM33P57088 247 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 GUCA2BQ16661 112 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 PHYHD1Q5SRE7 291 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 C1QL2Q7Z5L3 287 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 NAA40Q86UY6 237 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 WDR31Q8NA23 367 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR8B3Q8NGG8 313 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR56B2PQ8NGI1 322 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR14K1Q8NGZ2 314 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 CPNE2Q96FN4 548 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 REEP6Q96HR9 211 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR8B2Q96RD0 313 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 DIRC2Q96SL1 478 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 IFT46Q9NQC8 304 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 METRNQ9UJH8 293 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 RBM7Q9Y580 266 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 SOCS1O15524 211 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 NGFP01138 241 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 FCER2P06734 321 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM225BP0DP42 221 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 SRD5A1P18405 259 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 EDDM3BP56851 147 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 ERVS71-1P61550 626 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 MKXQ8IYA7 352 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM123Q8N131 208 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 ITLN1Q8WWA0 313 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 HPSE2Q8WWQ2 592 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 C22orf15Q8WYQ4 148 aa6.27□□□□□ -1.41
CDC42BPA-208ENST00000442054 BPESC1Q9GZL8 116 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms