RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ADAT1Q9BUB4 502 aaKnown RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 TMEM165Q9HC07 324 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 TREM2Q9NZC2 230 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 PFDN2Q9UHV9 154 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 PROCRQ9UNN8 238 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 CSAG2Q9Y5P2 127 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 IGKV1D-8A0A087WSZ0 117 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 hCG_1807616A0A1W2PRN6 198 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 LEUTXA8MZ59 168 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 EEF1E1-BLOC1S5C9J1V9 151 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 NPIPB11E5RHQ5 1161 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 NGFP01138 241 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 TK1P04183 234 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 ACAA1P09110 424 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-209ENST00000440653 TPT1P13693 172 aaKnown RBP7.79□□□□□ -1.16
HDAC6-209ENST00000440653 IDH3GP51553 393 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-209ENST00000440653 PRSS12P56730 875 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 ANKRD55Q3KP44 614 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 C3orf36Q3SXR2 165 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 TOR2AQ5JU69 321 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 THOC7Q6I9Y2 204 aaKnown RBP7.79□□□□□ -1.16
HDAC6-209ENST00000440653 HAGHLQ6PII5 290 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-209ENST00000440653 CCDC28AQ8IWP9 274 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 FAM58AQ8N1B3 248 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 CNEP1R1Q8N9A8 125 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 SPERTQ8NA61 448 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 POC1AQ8NBT0 407 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 OR5M9Q8NGP3 310 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 NEK7Q8TDX7 302 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 DCUN1D4Q92564 292 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 ABHD14BQ96IU4 210 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 AQP10Q96PS8 301 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 SPIN2AQ99865 258 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 SMR3AQ99954 134 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 SPIN2BQ9BPZ2 258 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 SLX1AQ9BQ83 275 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 CABLES2Q9BTV7 478 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 RSRP1Q9BUV0 290 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 BCL2L14Q9BZR8 327 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 FGF23Q9GZV9 251 aaPredicted RBP7.79□□□□□ -1.16
HDAC6-209ENST00000440653 METTL8Q9H825 291 aaKnown RBP7.79□□□□□ -1.16
HDAC6-209ENST00000440653 Q9N2K0 584 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 SLC2A9Q9NRM0 540 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 RDH8Q9NYR8 311 aa7.79□□□□□ -1.16
HDAC6-209ENST00000440653 C13orf42A0A1B0GVH6 325 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 FAM221AA4D161 298 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 MSTNO14793 375 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 TAAR5O14804 337 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 CFDP00746 253 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 KNG1P01042 644 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 PPYP01298 95 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 NMBP08949 121 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 HOXD4P09016 255 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 WNT2P09544 360 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 CCL2P13500 99 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 PRKACAP17612 351 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 FCGR2CP31995 323 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 OPRM1P35372 400 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 KIR2DL2P43627 348 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 NPBWR2P48146 333 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 PIGPP57054 158 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 HLA-DRB3P79483 266 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 LRRC37A5PQ49AS3 106 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 EIF5AL1Q6IS14 154 aaKnown RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 Q6ZS92 163 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 BEND4Q6ZU67 534 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 PDZD9Q8IXQ8 264 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 GCNT2Q8N0V5 402 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 LGI3Q8N145 548 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 C9orf106Q8NAJ2 232 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 NAXEQ8NCW5 288 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 OR4A4PQ8NGN8 299 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 RTN4IP1Q8WWV3 396 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 TOMM40LQ969M1 308 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 CITED4Q96RK1 184 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 ZNF471Q9BX82 626 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 OR51I2Q9H344 312 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 PLSCR4Q9NRQ2 329 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 MTCH1Q9NZJ7 389 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 KLF2Q9Y5W3 355 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 ATP23Q9Y6H3 246 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-209ENST00000440653 ZGRF1Q86YA3 2104 aa7.78□□□□□ -1.16
HDAC6-209ENST00000440653 TRDCB7Z8K6 153 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 F8VVB4 439 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 F8VWA3 439 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 LYZL6O75951 148 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 SPDEFO95238 335 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 IGLV1-44P01699 117 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 RLN2P04090 185 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 PGA5P0DJD9 388 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 PI3P19957 117 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 KITLGP21583 273 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 ZP3P21754 424 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 GLRA1P23415 457 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 KCNJ3P48549 501 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 LUMP51884 338 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-209ENST00000440653 DAZAP2Q15038 168 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-209ENST00000440653 FAM76BQ5HYJ3 339 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 OR2T2Q6IF00 324 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms