RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ARRDC1Q8N5I2 433 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 UMAD1C9J7I0 102 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 K7EPK0 472 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 LYZL6O75951 148 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 ZNF616Q08AN1 781 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 ARL6IP1Q15041 203 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 PDCD1Q15116 288 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 CHRFAM7AQ494W8 412 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 TMEM42Q69YG0 159 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 CDPF1Q6NVV7 123 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 SLC25A26Q70HW3 274 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 FBXL14Q8N1E6 418 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 FAM71E2Q8N5Q1 922 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 ZNF611Q8N823 705 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 ZNF565Q8N9K5 539 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 KDF1Q8NAX2 398 aaPredicted RBP12.16□□□□□ -0.46
LIMD1-202ENST00000440097 OR13G1Q8NGZ3 307 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 Q96M66 194 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 PRRX2Q99811 253 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 HDHD3Q9BSH5 251 aaPredicted RBP12.16□□□□□ -0.46
LIMD1-202ENST00000440097 FAAP24Q9BTP7 215 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 SCRT1Q9BWW7 348 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 EHFQ9NZC4 300 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 ARHGAP21Q5T5U3 1957 aa12.16□□□□□ -0.46
LIMD1-202ENST00000440097 CEACAM18A8MTB9 384 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 GEMIN2O14893 280 aaKnown RBP12.15□□□□□ -0.46
LIMD1-202ENST00000440097 JTBO76095 146 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 IFNA2P01563 188 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 GPM6AP51674 278 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 UBE2NP61088 152 aaKnown RBP12.15□□□□□ -0.46
LIMD1-202ENST00000440097 DEFA6Q01524 100 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 PRDX4Q13162 271 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 SPATA46Q5T0L3 261 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 IGF2-ASQ6U949 168 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 COLCA1Q6ZS62 124 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 MDP1Q86V88 176 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 CD300LFQ8TDQ1 290 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 SPSB4Q96A44 273 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 POM121L2Q96KW2 1035 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 TM2D1Q9BX74 207 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 CNTNAP3Q9BZ76 1288 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 ZNF581Q9P0T4 197 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 SLC34A2O95436 690 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 IFNA17P01571 189 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 TMEM33P57088 247 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 TGFBR3Q03167 851 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 PEG10Q86TG7 708 aaKnown RBP12.15□□□□□ -0.46
LIMD1-202ENST00000440097 CALHM1Q8IU99 346 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 OSR2Q8N2R0 312 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 REPIN1Q9BWE0 567 aaKnown RBP12.15□□□□□ -0.46
LIMD1-202ENST00000440097 MEMO1Q9Y316 297 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 NBEAQ8NFP9 2946 aa12.15□□□□□ -0.46
LIMD1-202ENST00000440097 TNRC6AQ8NDV7 1962 aaKnown RBP12.15□□□□□ -0.47
LIMD1-202ENST00000440097 IGKV1-12A0A0C4DH73 117 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 IFITM10A6NMD0 228 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 IGKV1D-12P01611 117 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 COX5BP10606 129 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 RPS2P15880 293 aaKnown RBP12.14□□□□□ -0.47
LIMD1-202ENST00000440097 ACTBL2Q562R1 376 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 NSUN5P2Q63ZY6 315 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 IGFL2Q6UWQ7 119 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 CLEC9AQ6UXN8 241 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 SARAFQ96BY9 339 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 HIST1H2AAQ96QV6 131 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 IGHG3P01860 377 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 GAPDHP04406 335 aaKnown RBP12.14□□□□□ -0.47
LIMD1-202ENST00000440097 FHITP49789 147 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 TAS2R46P59540 309 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 KIAA0141Q14154 515 aaPredicted RBP12.14□□□□□ -0.47
LIMD1-202ENST00000440097 RHEBQ15382 184 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 IAH1Q2TAA2 248 aaPredicted RBP12.14□□□□□ -0.47
LIMD1-202ENST00000440097 AADACL3Q5VUY0 350 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 FAM214BQ7L5A3 538 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 ZNF383Q8NA42 475 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 OR1J1Q8NGS3 322 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 TECTBQ96PL2 329 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 LUZP4Q9P127 313 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 ANAPC10Q9UM13 185 aa12.14□□□□□ -0.47
LIMD1-202ENST00000440097 FAM221AA4D161 298 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 HOXA5P20719 270 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 IDH3GP51553 393 aaPredicted RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 SSTP61278 116 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 ZDHHC23Q8IYP9 409 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 DYRK2Q92630 601 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 BCL2L2Q92843 193 aaPredicted RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 SCGB3A2Q96PL1 93 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 FAM212BQ9NTI7 297 aaPredicted RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 DLL1O00548 723 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 KNG1P01042 644 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 OPRM1P35372 400 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 LHFPL1Q86WI0 220 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 GP6Q9HCN6 339 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 FBXO7Q9Y3I1 522 aa12.13□□□□□ -0.47
LIMD1-202ENST00000440097 LSM5Q9Y4Y9 91 aaKnown RBP12.13□□□□□ -0.47
LIMD1-202ENST00000440097 BSNQ9UPA5 3926 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms