RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C20orf204Q6ZNR8 217 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 GAPTQ8N292 157 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 DCUN1D4Q92564 292 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 H0YIZ8 118 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 SLC33A1O00400 549 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-216ENST00000437340 FABP6P51161 128 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 RND3P61587 244 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 LIAT1Q6ZQX7 453 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 MUCL1Q96DR8 90 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 CITED4Q96RK1 184 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 CABLES2Q9BTV7 478 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 GNRHRP30968 328 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 IAH1Q2TAA2 248 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-216ENST00000437340 GGNBP1Q5YKI7 109 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 RGS7BPQ6MZT1 257 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-216ENST00000437340 ALKAL2Q6UX46 152 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 Q6ZR03 302 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 C11orf53Q8IXP5 236 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 CISD2Q8N5K1 135 aaKnown RBP21.76■■□□□ 1.07
CPNE1-216ENST00000437340 ST8SIA2Q92186 375 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 PRORYQ9H606 182 aa21.76■■□□□ 1.07
CPNE1-216ENST00000437340 IGKV1-6A0A0C4DH72 117 aa21.75■■□□□ 1.07
CPNE1-216ENST00000437340 TMEM8BA6NDV4 472 aa21.75■■□□□ 1.07
CPNE1-216ENST00000437340 PRRG2O14669 202 aa21.75■■□□□ 1.07
CPNE1-216ENST00000437340 ZNF497Q6ZNH5 498 aa21.75■■□□□ 1.07
CPNE1-216ENST00000437340 LDLRAD3Q86YD5 345 aa21.75■■□□□ 1.07
CPNE1-216ENST00000437340 LGI3Q8N145 548 aa21.75■■□□□ 1.07
CPNE1-216ENST00000437340 SPEF1Q9Y4P9 236 aa21.75■■□□□ 1.07
CPNE1-216ENST00000437340 SPDEFO95238 335 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 SRPXP78539 464 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 RAB32Q13637 225 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 PCSK4Q6UW60 755 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 ZNF565Q8N9K5 539 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 GLYATL2Q8WU03 294 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 MSI2Q96DH6 328 aaKnown RBP21.74■■□□□ 1.07
CPNE1-216ENST00000437340 PIGMQ9H3S5 423 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 GSKIPQ9P0R6 139 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 DNAJB11Q9UBS4 358 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 GLS2Q9UI32 602 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 NPIPB11E5RHQ5 1161 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 SIRPB1O00241 398 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 GPR31O00270 319 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 MPPED1O15442 326 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 NUP62P37198 522 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-216ENST00000437340 ZNF83P51522 516 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 KDF1Q8NAX2 398 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-216ENST00000437340 OR11L1Q8NGX0 322 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 MRPL24Q96A35 216 aaKnown RBP21.74■■□□□ 1.07
CPNE1-216ENST00000437340 C18orf12Q96KH6 178 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 ARPC5LQ9BPX5 153 aa21.74■■□□□ 1.07
CPNE1-216ENST00000437340 FBXO9Q9UK97 447 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-216ENST00000437340 TLN1Q9Y490 2541 aaKnown RBP21.73■■□□□ 1.07
CPNE1-216ENST00000437340 A8MXE2 369 aa21.73■■□□□ 1.07
CPNE1-216ENST00000437340 C3orf80F5H4A9 247 aa21.73■■□□□ 1.07
CPNE1-216ENST00000437340 SP6Q3SY56 376 aa21.73■■□□□ 1.07
CPNE1-216ENST00000437340 PHYHIPLQ96FC7 376 aa21.73■■□□□ 1.07
CPNE1-216ENST00000437340 FZR1Q9UM11 496 aa21.73■■□□□ 1.07
CPNE1-216ENST00000437340 HAND1O96004 215 aa21.72■■□□□ 1.07
CPNE1-216ENST00000437340 CRYAAP02489 173 aa21.72■■□□□ 1.07
CPNE1-216ENST00000437340 RRASP10301 218 aa21.72■■□□□ 1.07
CPNE1-216ENST00000437340 RCC1P18754 421 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-216ENST00000437340 LMO1P25800 156 aa21.72■■□□□ 1.07
CPNE1-216ENST00000437340 BEX5Q5H9J7 111 aa21.72■■□□□ 1.07
CPNE1-216ENST00000437340 DOLPP1Q86YN1 238 aa21.72■■□□□ 1.07
CPNE1-216ENST00000437340 PLPPR1Q8TBJ4 325 aa21.72■■□□□ 1.07
CPNE1-216ENST00000437340 C3orf85A0A1B0GTC6 90 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 M0R1B8 84 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 PHF1O43189 567 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 NMBP08949 121 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 ZNF250P15622 560 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 PRR30Q53SZ7 412 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 WDR82Q6UXN9 313 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 C5orf24Q7Z6I8 188 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 OR10J5Q8NHC4 309 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 SECTM1Q8WVN6 248 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 CNTNAP3BQ96NU0 1288 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 AQP10Q96PS8 301 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 ZNF471Q9BX82 626 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 CNTNAP3Q9BZ76 1288 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 SLC5A7Q9GZV3 580 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 MSL2Q9HCI7 577 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 MED9Q9NWA0 146 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 OR5AC2Q9NZP5 309 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 WIPI2Q9Y4P8 454 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 RLN2P04090 185 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 GLRXP35754 106 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 H1FOOQ8IZA3 346 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 PRR7Q8TB68 274 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 PCNPQ8WW12 178 aaKnown RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 RRNAD1Q96FB5 475 aaKnown RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 KIRREL1Q96J84 757 aa21.71■■□□□ 1.07
CPNE1-216ENST00000437340 USB1Q9BQ65 265 aaKnown RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 MBNL3Q9NUK0 354 aaKnown RBP21.71■■□□□ 1.07
CPNE1-216ENST00000437340 IGHV3-64DA0A0J9YX35 117 aa21.7■■□□□ 1.06
CPNE1-216ENST00000437340 LUMP51884 338 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-216ENST00000437340 MRGPRGQ86SM5 289 aa21.7■■□□□ 1.06
CPNE1-216ENST00000437340 COMMD7Q86VX2 200 aa21.7■■□□□ 1.06
CPNE1-216ENST00000437340 SNRNP40Q96DI7 357 aaKnown RBP21.7■■□□□ 1.06
CPNE1-216ENST00000437340 TMEM222Q9H0R3 208 aa21.7■■□□□ 1.06
CPNE1-216ENST00000437340 TAAR3PQ9P1P4 343 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms