RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ARFRP1Q13795 201 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 ARL6IP1Q15041 203 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 PAN3Q58A45 887 aaKnown RBP5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 SHEQ5VZ18 495 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 LYPD2Q6UXB3 125 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF788Q6ZQV5 615 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 TRAPPC6BQ86SZ2 158 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 GVQW1Q8N7I0 195 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNRF1Q8ND25 227 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 PLPPR1Q8TBJ4 325 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 GAFA1Q96PS6 74 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 CCL13Q99616 98 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 TMEM246Q9BRR3 403 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 CHST6Q9GZX3 395 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 PALMDQ9NP74 551 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 TMEM140Q9NV12 185 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF701Q9NV72 531 aaPredicted RBP5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 ANAPC10Q9UM13 185 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 DOPEY1Q5JWR5 2465 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 IGKV1D-8A0A087WSZ0 117 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 LINC00854A0A1B0GVQ3 168 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ANKRD20A5PA0PJZ0 165 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 K7N7A8 449 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 PLA2G10O15496 165 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 SSX4O60224 188 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 RBBP9O75884 186 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 NAPSAO96009 420 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 MT-ND4P03905 459 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 TK1P04183 234 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 SELLP14151 372 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 PAX1P15863 534 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 TMEM33P57088 247 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 KLF9Q13886 244 aaPredicted RBP5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 RBM39Q14498 530 aaKnown RBP5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 AVPI1Q5T686 147 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 RSBN1Q5VWQ0 802 aaPredicted RBP5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 C16orf87Q6PH81 154 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF497Q6ZNH5 498 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 HOGA1Q86XE5 327 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 GAPTQ8N292 157 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 FGFRL1Q8N441 504 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF561Q8N587 486 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM216BQ8N7L0 139 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 MRPL30Q8TCC3 161 aaKnown RBP5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 MAFIPQ8WZ33 124 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 SNAPC3Q92966 411 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 COQ2Q96H96 371 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 SNX22Q96L94 193 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 CMSS1Q9BQ75 279 aaKnown RBP5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ST6GALNAC5Q9BVH7 336 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 PPA2Q9H2U2 334 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF665Q9H7R5 613 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 CHODLQ9H9P2 273 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 C12orf4Q9NQ89 552 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ETAA1Q9NY74 926 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 CTSZQ9UBR2 303 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF69Q9UC07 566 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF230Q9UIE0 474 aaPredicted RBP5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 CDC42EP3Q9UKI2 254 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 TBC1D24Q9ULP9 559 aa5.84□□□□□ -1.47
LSM3P3-201ENST00000436601 ADGRG4Q8IZF6 3080 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 TRBV6-6A0A0A6YYG2 114 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 TRAV39A0A0B4J263 110 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 MGST3O14880 152 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 SIGLEC5O15389 551 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 PPIHO43447 177 aaKnown RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 NDUFA2O43678 99 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 AMY1AP04745 511 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 CSN2P05814 226 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 FCGR3AP08637 254 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 GYPEP15421 78 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 DTYMKP23919 212 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 GIFP27352 417 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 RCVRNP35243 200 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 MDH2P40926 338 aaKnown RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 CBX5P45973 191 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 GLIPR1P48060 266 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 KCNJ3P48549 501 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 PAX5Q02548 391 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 SSBP1Q04837 148 aaKnown RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 AESQ08117 197 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 ATXN7L3Q14CW9 347 aaPredicted RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 GRK1Q15835 563 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 CARTPTQ16568 116 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 KHDC1LQ5JSQ8 128 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 TRIQKQ629K1 86 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 SLC35E4Q6ICL7 350 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 OR52W1Q6IF63 320 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF880Q6PDB4 577 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 C5orf24Q7Z6I8 188 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 PEG10Q86TG7 708 aaKnown RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF525Q8N782 197 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 RNF152Q8N8N0 203 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 ASCC1Q8N9N2 400 aaKnown RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 TMEM229BQ8NBD8 167 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 OR4K15Q8NH41 348 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 NEK7Q8TDX7 302 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 RAB1CQ92928 201 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 RAB24Q969Q5 203 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 MED30Q96HR3 178 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms