RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 FAM180AQ6UWF9 173 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 Q6ZPA2 131 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 BEND4Q6ZU67 534 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 MOB1BQ7L9L4 216 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 FAM169BQ8N8A8 192 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 WDR31Q8NA23 367 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 SPERTQ8NA61 448 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 SCCPDHQ8NBX0 429 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 RELL2Q8NC24 303 aaPredicted RBP10.91□□□□□ -0.66
DDX56-204ENST00000431640 GLYATL2Q8WU03 294 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 MRPL24Q96A35 216 aaKnown RBP10.91□□□□□ -0.66
DDX56-204ENST00000431640 MSI2Q96DH6 328 aaKnown RBP10.91□□□□□ -0.66
DDX56-204ENST00000431640 BCL2L14Q9BZR8 327 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 ZC4H2Q9NQZ6 224 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 CYTL1Q9NRR1 136 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 TMEM100Q9NV29 134 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 ASF1BQ9NVP2 202 aa10.91□□□□□ -0.66
DDX56-204ENST00000431640 TRAV24A0A0B4J272 114 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 A0A1W2PR80 420 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 MBD3L4A6NDZ8 208 aaPredicted RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 MBD3L3A6NE82 208 aaPredicted RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 MBD3L5A6NJ08 208 aaPredicted RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 NUDT19A8MXV4 375 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 E5RGE8 158 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 SH2D1BO14796 132 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 PHF1O43189 567 aaPredicted RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 TUSC2O75896 110 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 SCTP09683 121 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 ZNF250P15622 560 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 M6PRP20645 277 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 GNRHRP30968 328 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 KCNJ3P48549 501 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 ERVK11-1P61568 191 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 PSG7Q13046 419 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 OR8G1Q15617 311 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 SP6Q3SY56 376 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 ZNF585AQ6P3V2 769 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 Q6P435 159 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 VWA1Q6PCB0 445 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 LDLRAD3Q86YD5 345 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 CMTM1Q8IZ96 169 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 BVESQ8NE79 360 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 MBD3L2Q8NHZ7 208 aaPredicted RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 MRPL30Q8TCC3 161 aaKnown RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 ADAT1Q9BUB4 502 aaKnown RBP10.9□□□□□ -0.66
DDX56-204ENST00000431640 SLC5A7Q9GZV3 580 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 GLS2Q9UI32 602 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 AMDHD2Q9Y303 409 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 NSG2Q9Y328 171 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 EPG5Q9HCE0 2579 aa10.9□□□□□ -0.66
DDX56-204ENST00000431640 DUXBA0A1W2PPF3 345 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 K7EPK0 472 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 BET1O15155 118 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 WDR1O75083 606 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 CRYZL1O95825 349 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 CRYABP02511 175 aaKnown RBP10.9□□□□□ -0.67
DDX56-204ENST00000431640 HKR1P10072 659 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 ZNF44P15621 663 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 RPL12P30050 165 aaKnown RBP10.9□□□□□ -0.67
DDX56-204ENST00000431640 MZT1Q08AG7 82 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 KLRB1Q12918 225 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 TSC22D1Q15714 1073 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 SPIN3Q5JUX0 258 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 MYPOPQ86VE0 399 aaPredicted RBP10.9□□□□□ -0.67
DDX56-204ENST00000431640 FAM71E2Q8N5Q1 922 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 OR8G5Q8NG78 346 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 RDH5Q92781 318 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 CCDC120Q96HB5 630 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 ZNF488Q96MN9 340 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 TMEM56Q96MV1 263 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 TMEM222Q9H0R3 208 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 IL36RNQ9UBH0 155 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 UBE2J1Q9Y385 318 aaPredicted RBP10.9□□□□□ -0.67
DDX56-204ENST00000431640 TMEM56-RWDD3S4R434 201 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 SHANK1Q9Y566 2161 aa10.9□□□□□ -0.67
DDX56-204ENST00000431640 KMT2BQ9UMN6 2715 aaPredicted RBP10.89□□□□□ -0.67
DDX56-204ENST00000431640 FGF16O43320 207 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 RHBDL1O75783 438 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 JTBO76095 146 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 ZNF205O95201 554 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 CDS2O95674 445 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 CGAP01215 116 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 PGA5P0DJD9 388 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 KITLGP21583 273 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 HLA-DRB3P79483 266 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 ZNF146Q15072 292 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 ZNF718Q3SXZ3 478 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 GPR157Q5UAW9 335 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 LYZL2Q7Z4W2 148 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 RPRMLQ8N4K4 120 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 ZNF610Q8N9Z0 462 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 OR10J5Q8NHC4 309 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 SECTM1Q8WVN6 248 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 STARD4Q96DR4 205 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 KIRREL1Q96J84 757 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 BBC3Q96PG8 261 aaPredicted RBP10.89□□□□□ -0.67
DDX56-204ENST00000431640 DMRTA2Q96SC8 542 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms