RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 COMMD1Q8N668 190 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 DRAM1Q8N682 238 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 Q8NFD4 153 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 TNFAIP8L1Q8WVP5 186 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 NR1H4Q96RI1 486 aaPredicted RBP11.8□□□□□ -0.52
MSH5-208ENST00000429846 GPER1Q99527 375 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 PDCD1LG2Q9BQ51 273 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 ISG20L2Q9H9L3 353 aaKnown RBP11.8□□□□□ -0.52
MSH5-208ENST00000429846 ZFP57Q9NU63 452 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 ERVK13-1Q9NX77 482 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 GMPPBQ9Y5P6 360 aa11.8□□□□□ -0.52
MSH5-208ENST00000429846 GABRPO00591 440 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 CD2P06729 351 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 THBS3P49746 956 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
MSH5-208ENST00000429846 KRTAP10-11P60412 298 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 ZSCAN26Q16670 478 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 NHLRC3Q5JS37 347 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 LPCAT4Q643R3 524 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 ETV3LQ6ZN32 361 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 OR2W3Q7Z3T1 314 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 FOXRED2Q8IWF2 684 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 MRPL41Q8IXM3 137 aaKnown RBP11.79□□□□□ -0.52
MSH5-208ENST00000429846 OR10X1Q8NGY0 326 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 MRGPRDQ8TDS7 321 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 ZNF649Q9BS31 505 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 IFT22Q9H7X7 185 aa11.79□□□□□ -0.52
MSH5-208ENST00000429846 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.79□□□□□ -0.52
MSH5-208ENST00000429846 ZMAT5Q9UDW3 170 aaKnown RBP11.79□□□□□ -0.52
MSH5-208ENST00000429846 WI2-2373I1.2A0A1W2PRP0 233 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 HSD17B6O14756 317 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 IGHG2P01859 326 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 SSTR5P35346 364 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 ZNF816Q0VGE8 651 aaPredicted RBP11.78□□□□□ -0.52
MSH5-208ENST00000429846 PIGYQ3MUY2 71 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 ASCL4Q6XD76 172 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 SLC35E3Q7Z769 313 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 LINC00596Q86U02 117 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 ZNF329Q86UD4 541 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 CBR4Q8N4T8 237 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 RHOXF1Q8NHV9 184 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 PLPPR1Q8TBJ4 325 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 LEAP2Q969E1 77 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 DPCDQ9BVM2 203 aaPredicted RBP11.78□□□□□ -0.52
MSH5-208ENST00000429846 JAM3Q9BX67 310 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 FAM192AQ9GZU8 254 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 FAM118AQ9NWS6 357 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 IL36GQ9NZH8 169 aa11.78□□□□□ -0.52
MSH5-208ENST00000429846 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
MSH5-208ENST00000429846 E9PI62 339 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 H3BNX3 289 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 IGHV3-7P01780 117 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 GZMHP20718 246 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 HOXD3P31249 432 aaPredicted RBP11.77□□□□□ -0.53
MSH5-208ENST00000429846 MYCNOSP40205 109 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 GNG10P50151 68 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 EBI3Q14213 229 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 DIAPH2-AS1Q14236 149 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 CCDC58Q4VC31 144 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 KLHL22Q53GT1 634 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 SATL1Q86VE3 508 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 IZUMO1Q8IYV9 350 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 OR51A2Q8NGJ7 313 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 RFESDQ8TAC1 157 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 GPR148Q8TDV2 347 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.53
MSH5-208ENST00000429846 C9orf16Q9BUW7 83 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 MRPS18AQ9NVS2 196 aaKnown RBP11.77□□□□□ -0.53
MSH5-208ENST00000429846 PAK1IP1Q9NWT1 392 aaPredicted RBP11.77□□□□□ -0.53
MSH5-208ENST00000429846 AASSQ9UDR5 926 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 ST3GAL6Q9Y274 331 aa11.77□□□□□ -0.53
MSH5-208ENST00000429846 NUDT19A8MXV4 375 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 ZNF780AO75290 641 aaPredicted RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 OR7C1O76099 320 aaPredicted RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 HTR3BO95264 441 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 GAPDHP04406 335 aaKnown RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 GP2P55259 537 aaKnown RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 RBM11P57052 281 aaKnown RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 PPP3R1P63098 170 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 LTC4SQ16873 150 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 Q3ZCU0 254 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 RPL22L1Q6P5R6 122 aaKnown RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 TGIF2LXQ8IUE1 241 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 C10orf67Q8IYJ2 551 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 STPG2Q8N412 459 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 LINC00311Q8N616 119 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 C8orf31Q8N9H6 132 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 SUMF2Q8NBJ7 301 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 KLHL30-AS1Q8NEE0 82 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 OR52M1Q8NGK5 317 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 OR10K1Q8NGX5 313 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 TMEM106AQ96A25 262 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 P2RX4Q99571 388 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 S100A13Q99584 98 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms