RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LYNX1P0DP58 116 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 HLA-GP17693 338 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 ZBTB25P24278 435 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 GMFBP60983 142 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 IL13RA1P78552 427 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 MZT1Q08AG7 82 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 DHRS2Q13268 280 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 TMEM128Q5BJH2 165 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 C11orf88Q6PI97 169 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 LHFPL1Q86WI0 220 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 SPERTQ8NA61 448 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 GRPEL2Q8TAA5 225 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 ELMOD3Q96FG2 381 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 FOXC2Q99958 501 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 TMPRSS13Q9BYE2 586 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 C12orf4Q9NQ89 552 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 DECR2Q9NUI1 292 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 NECAP2Q9NVZ3 263 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 TREM2Q9NZC2 230 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 ZDHHC8Q9ULC8 765 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 MYO9AB2RTY4 2548 aa13.15□□□□□ -0.3
SHOX2-202ENST00000425436 F5H5P2 479 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 DUS4LO95620 317 aaKnown RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 BCL3P20749 454 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 COL8A2P25067 703 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 CD34P28906 385 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 TNFAIP6P98066 277 aaPredicted RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 IFITM2Q01629 132 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 HAGHLQ6PII5 290 aaPredicted RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 Q6ZS49 121 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 PEG10Q86TG7 708 aaKnown RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 RTN4RL2Q86UN3 420 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 UXS1Q8NBZ7 420 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 MITD1Q8WV92 249 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 NEU4Q8WWR8 484 aaPredicted RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 SLAMF9Q96A28 289 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 SULT4A1Q9BR01 284 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 MTCH1Q9NZJ7 389 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 PIPOXQ9P0Z9 390 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 ZNF230Q9UIE0 474 aaPredicted RBP13.14□□□□□ -0.31
SHOX2-202ENST00000425436 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 OTOGQ6ZRI0 2925 aa13.14□□□□□ -0.31
SHOX2-202ENST00000425436 A0A0B4J2A0 478 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 C9orf170A2RU37 121 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 MCRIP1C9JLW8 97 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 FCGR3AP08637 254 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 DAOP14920 347 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 NPBWR2P48146 333 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 DHODHQ02127 395 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 FGL1Q08830 312 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 RBM39Q14498 530 aaKnown RBP13.13□□□□□ -0.31
SHOX2-202ENST00000425436 OR8G1Q15617 311 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 Q5PR19 223 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 DHRS11Q6UWP2 260 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 C9orf62Q8N4C0 152 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 ZNF525Q8N782 197 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 MARCH1Q8TCQ1 289 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 MRGPRFQ96AM1 343 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 IFT22Q9H7X7 185 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 RCC2Q9P258 522 aaKnown RBP13.13□□□□□ -0.31
SHOX2-202ENST00000425436 SHPKQ9UHJ6 478 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 GOSR2O14653 212 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 ADH4P08319 380 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 TGIF2LYQ8IUE0 185 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 KRTAP1-3Q8IUG1 177 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 FAM58AQ8N1B3 248 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 ITLN1Q8WWA0 313 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 OR2V2Q96R30 315 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 DIRC2Q96SL1 478 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 ADAT1Q9BUB4 502 aaKnown RBP13.13□□□□□ -0.31
SHOX2-202ENST00000425436 CHIAQ9BZP6 476 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 SAP30LQ9HAJ7 183 aa13.13□□□□□ -0.31
SHOX2-202ENST00000425436 BARX1Q9HBU1 254 aaPredicted RBP13.13□□□□□ -0.31
SHOX2-202ENST00000425436 C14orf166Q9Y224 244 aaKnown RBP13.13□□□□□ -0.31
SHOX2-202ENST00000425436 DYSFO75923 2080 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 OR5H8P0DN80 308 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 AKR1C4P17516 323 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 TNFSF4P23510 183 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 SRSF4Q08170 494 aaKnown RBP13.12□□□□□ -0.31
SHOX2-202ENST00000425436 PPP1R1AQ13522 171 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 LAMTOR1Q6IAA8 161 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 WFDC11Q8NEX6 87 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 CXXC4Q9H2H0 198 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 OPN4Q9UHM6 478 aa13.12□□□□□ -0.31
SHOX2-202ENST00000425436 A0A1B0GWJ7 208 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 HMSDA8MTL9 139 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 H7C1Q1 480 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 CD55P08174 381 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 CTXN2P0C2S0 81 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 NPY4RP50391 375 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
SHOX2-202ENST00000425436 AADACL3Q5VUY0 350 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms