RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 WDFY2Q96P53 400 aa12.97□□□□□ -0.33
DDX55-203ENST00000421670 TRBV23-1A0A0A0MS06 115 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 SERPINE3A8MV23 424 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 ECDO95905 644 aaPredicted RBP12.96□□□□□ -0.33
DDX55-203ENST00000421670 GSTP1P09211 210 aaKnown RBP12.96□□□□□ -0.33
DDX55-203ENST00000421670 GLP1RP43220 463 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 ARFRP1Q13795 201 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 SLC35E4Q6ICL7 350 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 Q6ZPA2 131 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 TRAPPC6BQ86SZ2 158 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 SNX29P2Q8IUI4 249 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 OR6Q1Q8NGQ2 317 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 C8orf46Q8TAG6 207 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 MRPL30Q8TCC3 161 aaKnown RBP12.96□□□□□ -0.33
DDX55-203ENST00000421670 DACT3Q96B18 629 aaPredicted RBP12.96□□□□□ -0.33
DDX55-203ENST00000421670 CMSS1Q9BQ75 279 aaKnown RBP12.96□□□□□ -0.33
DDX55-203ENST00000421670 AUNIPQ9H7T9 357 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 CHMP1AQ9HD42 196 aaPredicted RBP12.96□□□□□ -0.33
DDX55-203ENST00000421670 C12orf4Q9NQ89 552 aa12.96□□□□□ -0.33
DDX55-203ENST00000421670 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDX55-203ENST00000421670 ZFHX3Q15911 3703 aa12.96□□□□□ -0.34
DDX55-203ENST00000421670 PPIAL4CA0A0B4J2A2 164 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 IGHV2-70DA0A0C4DH43 119 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 A0A0G2JMP0 313 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 A0A0X1KG70 313 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 FUOMA2VDF0 154 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 NAPSAO96009 420 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 MT-ND4P03905 459 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 CD3GP09693 182 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 PPIAL4GP0DN37 164 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 CCL3L1P16619 93 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 MNDAP41218 407 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 GZMKP49863 264 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 HACD4Q5VWC8 232 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 TMEM200BQ69YZ2 307 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 GAPTQ8N292 157 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 LY6G5BQ8NDX9 201 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 OR4M2Q8NGB6 313 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 MRGPRDQ8TDS7 321 aa12.95□□□□□ -0.34
DDX55-203ENST00000421670 POLR3KQ9Y2Y1 108 aaPredicted RBP12.95□□□□□ -0.34
DDX55-203ENST00000421670 hADV38S2A0JD32 116 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 ENSAO43768 121 aaKnown RBP12.94□□□□□ -0.34
DDX55-203ENST00000421670 CA11O75493 328 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 TGFAP01135 160 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 HLA-DQB1P01920 261 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 RCC1P18754 421 aaPredicted RBP12.94□□□□□ -0.34
DDX55-203ENST00000421670 GNG2P59768 71 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 MRPS15P82914 257 aaKnown RBP12.94□□□□□ -0.34
DDX55-203ENST00000421670 GUCA2AQ02747 115 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 MEF2CQ06413 473 aaPredicted RBP12.94□□□□□ -0.34
DDX55-203ENST00000421670 ARL6IP1Q15041 203 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 SETD6Q8TBK2 473 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 C18orf12Q96KH6 178 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 HIF1ANQ9NWT6 349 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 ONECUT1Q9UBC0 465 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 TRAPPC2LQ9UL33 140 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 LINC00312Q9Y6C7 94 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 TRGV10A0A0A0MS01 117 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 MEIOCA2RUB1 952 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 MEIS3P1A6NDR6 274 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 SSX5O60225 188 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 LIPFP07098 398 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 IL18Q14116 193 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 PNLIPRP3Q17RR3 467 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 C11orf91Q3C1V1 193 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 RNASE12Q5GAN4 147 aaKnown RBP12.94□□□□□ -0.34
DDX55-203ENST00000421670 UBALD1Q8TB05 177 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 MAFIPQ8WZ33 124 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 TMEM186Q96B77 213 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 OR6C3Q9NZP0 311 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 LPAR3Q9UBY5 353 aa12.94□□□□□ -0.34
DDX55-203ENST00000421670 ZNF230Q9UIE0 474 aaPredicted RBP12.94□□□□□ -0.34
DDX55-203ENST00000421670 F8P00451 2351 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 TRAV20A0A0B4J274 112 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 MELTFP08582 738 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 FCGR3AP08637 254 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 SSTR5P35346 364 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 ERVFRD-1P60508 538 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 DCAF12L2Q5VW00 463 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 CYB5R2Q6BCY4 276 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 FAM131AQ6UXB0 335 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 C5orf24Q7Z6I8 188 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 CCDC190Q86UF4 302 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 GLCCI1Q86VQ1 547 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 ZNF714Q96N38 554 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 ABHD1Q96SE0 405 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 SMR3AQ99954 134 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 INSIG2Q9Y5U4 225 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 V9GYH0 126 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 MXRA5Q9NR99 2828 aa12.93□□□□□ -0.34
DDX55-203ENST00000421670 KIR2DS1A0A191URI9 304 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 FABP12A6NFH5 140 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 FCER2P06734 321 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 INHBBP09529 407 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 DVL1P1P54792 670 aaPredicted RBP12.92□□□□□ -0.34
DDX55-203ENST00000421670 ARF6P62330 175 aa12.92□□□□□ -0.34
DDX55-203ENST00000421670 BTNL3Q6UXE8 466 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms