RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TMEM225Q6GV28 225 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RTL6Q6ICC9 239 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 DNM1P34Q6PK57 102 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 DEGS2Q6QHC5 323 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OPN5Q6U736 354 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OLIG3Q7RTU3 272 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 DCXRQ7Z4W1 244 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TMED4Q7Z7H5 227 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 HMGN2P46Q86SG4 172 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 NAA40Q86UY6 237 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ZNF679Q8IYX0 411 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ABHD12Q8N2K0 398 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ARL14Q8N4G2 192 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 C2orf73Q8N5S3 287 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 LINC01555Q8NAE3 123 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR8G5Q8NG78 346 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR51D1Q8NGF3 324 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR52E1Q8NGJ3 308 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR13C8Q8NGS7 320 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR9A4Q8NGU2 314 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR13D1Q8NGV5 346 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR10R2Q8NGX6 335 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR8S1Q8NH09 359 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OTOSQ8NHW6 89 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 LYPD6BQ8NI32 183 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RNASE11Q8TAA1 199 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 C8orf46Q8TAG6 207 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 NANPQ8TBE9 248 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 PAQR8Q8TEZ7 354 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 AQP3Q92482 292 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 DCUN1D4Q92564 292 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RASL10AQ92737 203 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TAF15Q92804 592 aaKnown RBP eCLIP2.14□□□□□ -2.07
VPS41-206ENST00000418457 FGF13Q92913 245 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SMARCD2Q92925 531 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 HIST1H2BAQ96A08 127 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CPNE4Q96A23 557 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 RERGQ96A58 199 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 ANKRD9Q96BM1 317 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 TM4SF19Q96DZ7 209 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RAB3CQ96E17 227 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SMIM10Q96HG1 83 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 C2orf50Q96LR7 162 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 Q96M85 177 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ZNF75AQ96N20 296 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR8B4Q96RC9 309 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 NMNAT3Q96T66 252 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 GAL3ST1Q99999 423 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CMSS1Q9BQ75 279 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 SULT4A1Q9BR01 284 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 NUDT9Q9BW91 350 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 GPR174Q9BXC1 333 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 STRADBQ9C0K7 418 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 AICDAQ9GZX7 198 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CST11Q9H112 138 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TLNRD1Q9H1K6 362 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RGCCQ9H4X1 137 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 UCK1Q9HA47 277 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TAF9BQ9HBM6 251 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 PRMT8Q9NR22 394 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 FAM212BQ9NTI7 297 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 CUTCQ9NTM9 273 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 UFSP2Q9NUQ7 469 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TREM2Q9NZC2 230 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ZNF319Q9P2F9 582 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 MIOXQ9UGB7 285 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CACFD1Q9UGQ2 172 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 APOBEC3BQ9UH17 382 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 MRM2Q9UI43 246 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 IKZF2Q9UKS7 526 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RAB22AQ9UL26 194 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ANAPC10Q9UM13 185 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 VSIG4Q9Y279 399 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 MRPS33Q9Y291 106 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 NTNG1Q9Y2I2 539 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR10H1Q9Y4A9 318 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR1A2Q9Y585 309 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TIMM10BQ9Y5J6 103 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CSAG2Q9Y5P2 127 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SLC22A7Q9Y694 548 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 FER1L5A0AVI2 2057 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 NUMA1Q14980 2115 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CDH23Q9H251 3354 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 MYOFQ9NZM1 2061 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TRAV8-7A0A075B6U6 113 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 A0A087WWC5 75 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 PIGBOS1A0A0B4J2F0 54 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 A0A1W2PPR1 153 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ARGFXA6NJG6 315 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 B4DEV8 164 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SEC14L6B5MCN3 397 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TSTD3H0UI37 97 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 XKRYO14609 159 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SYT7O43581 403 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 CA11O75493 328 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 MED6O75586 246 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 AKR7A3O95154 331 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 OR6A2O95222 327 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 FARS2O95363 451 aaKnown RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 MT-ATP6P00846 226 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms