RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 AICDAQ9GZX7 198 aa10.4□□□□□ -0.75
PTPRF-205ENST00000414879 ZNF331Q9NQX6 463 aaPredicted RBP10.4□□□□□ -0.75
PTPRF-205ENST00000414879 RAB27BO00194 218 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 GPR6P46095 362 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-205ENST00000414879 TGIF1Q15583 401 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 SEZ6L2Q6UXD5 910 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 MOB3AQ96BX8 217 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 R3HDM4Q96D70 268 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 BARX1Q9HBU1 254 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-205ENST00000414879 OR5H1A6NKK0 313 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 NCBP2LA6PVI3 153 aaKnown RBP10.39□□□□□ -0.75
PTPRF-205ENST00000414879 HYAL3O43820 417 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-205ENST00000414879 TBX6O95947 436 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-205ENST00000414879 IL11P20809 199 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 MC5RP33032 325 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 ETV3LQ6ZN32 361 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 TBC1D26Q86UD7 250 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 OR10Z1Q8NGY1 313 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 MITD1Q8WV92 249 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 PPP1R3EQ9H7J1 279 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 RPH3ALQ9UNE2 315 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 RNF115Q9Y4L5 304 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 PRR19A6NJB7 356 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 ZNF727A8MUV8 499 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 SYNGR2O43760 224 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 C1QCP02747 245 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 AVPI1Q5T686 147 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 FDCSPQ8NFU4 85 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 GNG13Q9P2W3 67 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 CLEC3BP05452 202 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 GNG10P50151 68 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 CNN1P51911 297 aaKnown RBP10.39□□□□□ -0.75
PTPRF-205ENST00000414879 RHOBP62745 196 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 TMEM41BQ5BJD5 291 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 OPN3Q9H1Y3 402 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-205ENST00000414879 TIMM9Q9Y5J7 89 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 KCNMB2Q9Y691 235 aa10.39□□□□□ -0.75
PTPRF-205ENST00000414879 F2RP25116 425 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 ASCL1P50553 236 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 FAM122CQ6P4D5 195 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 TEX261Q6UWH6 196 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 BTNL8Q6UX41 500 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-205ENST00000414879 SRXN1Q9BYN0 137 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 SLC2A9Q9NRM0 540 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 U3KQ87 197 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 DOCK4Q8N1I0 1966 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 DCTN6O00399 190 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 UMODP07911 640 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 SPNP16150 400 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 PMP22Q01453 160 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 RSPO4Q2I0M5 234 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-205ENST00000414879 SP6Q3SY56 376 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 LCN15Q6UWW0 184 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 CLEC18BQ6UXF7 455 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 ZFP62Q8NB50 900 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-205ENST00000414879 AAMDCQ9H7C9 122 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 SLC25A10Q9UBX3 287 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-205ENST00000414879 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 CHD5Q8TDI0 1954 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 OR4A8P0C604 315 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 MGST1P10620 155 aaKnown RBP10.38□□□□□ -0.75
PTPRF-205ENST00000414879 CD59P13987 128 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 AKR1C3P42330 323 aa10.38□□□□□ -0.75
PTPRF-205ENST00000414879 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
PTPRF-205ENST00000414879 B9A039 149 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 RAB29O14966 203 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 ADRB1P08588 477 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 COX6B1P14854 86 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 HOXD11P31277 338 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 NPBWR1P48145 328 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 COMPP49747 757 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 DMRTC1Q5HYR2 192 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 GVQW1Q8N7I0 195 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 BPIFCQ8NFQ6 507 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 OR4F5Q8NH21 305 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 ZCCHC14Q8WYQ9 949 aaKnown RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 OR4F4Q96R69 305 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 UBTD1Q9HAC8 227 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 PRSS50Q9UI38 385 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 SIRT4Q9Y6E7 314 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 GLRXP35754 106 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 RAB32Q13637 225 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 PDCD1Q15116 288 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 DBX2Q6ZNG2 339 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 OR4F17Q8NGA8 305 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 FAM57AQ8TBR7 257 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 GINS3Q9BRX5 216 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 PPP5D1E7EU14 171 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 TGFBR3LH3BV60 316 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 FCGR3AP08637 254 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 HNF1AP20823 631 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 PTGDSP41222 190 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 HABP2Q14520 560 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 HLXQ14774 488 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 LPAR5Q9H1C0 372 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms