RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 C20orf204Q6ZNR8 217 aa12.52□□□□□ -0.4
SEMA3F-202ENST00000413852 C1QL4Q86Z23 238 aa12.52□□□□□ -0.4
SEMA3F-202ENST00000413852 FADS6Q8N9I5 356 aa12.52□□□□□ -0.4
SEMA3F-202ENST00000413852 ANGPTL4Q9BY76 406 aa12.52□□□□□ -0.4
SEMA3F-202ENST00000413852 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.4
SEMA3F-202ENST00000413852 PITX3O75364 302 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 DEFA4P12838 97 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 CD200P41217 278 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 ELLP55199 621 aaPredicted RBP12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 MRPS34P82930 218 aaKnown RBP12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 ARL16Q0P5N6 197 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 Q6ZRM9 215 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 RNF138Q8WVD3 245 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 POM121Q96HA1 1249 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 FAM210BQ96KR6 192 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 TAAR3PQ9P1P4 343 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 DKKL1Q9UK85 242 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 ARGFXA6NJG6 315 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 EDN3P14138 238 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 BMP5P22003 454 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 RBM11P57052 281 aaKnown RBP12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF266Q14584 549 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 C10orf128Q5T292 105 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 LRP11Q86VZ4 500 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 RPRMQ9NS64 109 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 KIAA1456Q9P272 454 aa12.52□□□□□ -0.41
SEMA3F-202ENST00000413852 SLC22A20A6NK97 555 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 HS3ST1O14792 307 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 PHOX2AO14813 284 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 METTL15P1P0C7V9 234 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 GLIPR1P48060 266 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 GPM6AP51674 278 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF726P1Q15940 193 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF295-AS1Q8N0V1 137 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 ADPRHL1Q8NDY3 354 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 SEC14L6B5MCN3 397 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 GATCO43716 136 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 CA11O75493 328 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 SELLP14151 372 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 MAS1LP35410 378 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 HIST1H3AP68431 136 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 RTP5Q14D33 572 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 ARL6IP1Q15041 203 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 CEACAM16Q2WEN9 425 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 HIST2H3PS2Q5TEC6 136 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 LFNGQ8NES3 379 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 OR5T1Q8NG75 326 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 IL1F10Q8WWZ1 152 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 SPSB1Q96BD6 273 aa12.51□□□□□ -0.41
SEMA3F-202ENST00000413852 IGLV3-12A0A075B6K2 115 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 DKK1O94907 266 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF16P17020 682 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 APLNRP35414 380 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 LBX1P52954 281 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 FOXG1P55316 489 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 HLA-DRB3P79483 266 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 GFOD1Q9NXC2 390 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 YKT6O15498 198 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 CXCL13O43927 109 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 RFPL3SP0C7P2 107 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 RDH5Q92781 318 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 WNT5BQ9H1J7 359 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 IGLV3-32A0A0A0MS00 114 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 HOXA4Q00056 320 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 ZFP36L1Q07352 338 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 FAM27BQ5VT28 67 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 GATAD1Q8WUU5 269 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 RARRES3Q9UL19 164 aa12.5□□□□□ -0.41
SEMA3F-202ENST00000413852 OR5H1A6NKK0 313 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 HSPA12AO43301 675 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 PSG2P11465 335 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 ERVS71-1P61550 626 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 FAM53AQ6NSI3 398 aaPredicted RBP12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 VASH2Q86V25 355 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 ABHD3Q8WU67 409 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 AURKAIP1Q9NWT8 199 aaPredicted RBP12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 A0A087X0M5 115 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 A0A1B0GX30 115 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 CEBPZOSA8MTT3 80 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 CNOT4O95628 575 aaKnown RBP12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 LHFPL2Q6ZUX7 228 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 SSX9Q7RTT3 188 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 GPR146Q96CH1 333 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 CCDC74BQ96LY2 380 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 GAB2Q9UQC2 676 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 DOCK11Q5JSL3 2073 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 IGHV5-10-1A0A0J9YXX1 117 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 hCG_38984A0A1B0GV85 526 aa12.49□□□□□ -0.41
SEMA3F-202ENST00000413852 SYNGR1O43759 233 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms