RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 AMBPP02760 352 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 GFERP55789 205 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 TMEM196Q5HYL7 178 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 STARD4Q96DR4 205 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 DENND4AQ7Z401 1863 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 RRP8O43159 456 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 SLC25A6P12236 298 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 OR8B8Q15620 311 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 BMPERQ8N8U9 685 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 RIMS4Q9H426 269 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF331Q9NQX6 463 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 SLC7A10Q9NS82 523 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 H3BMH7 237 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 FOXS1O43638 330 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 CLDN15P56746 228 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 ZP4Q12836 540 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 NUFIP2Q7Z417 695 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 GCNT2Q8N0V5 402 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 OR5AS1Q8N127 324 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 C10orf35Q96D05 121 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 C11orf94C9JXX5 98 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 MOB3AQ96BX8 217 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 KCNIP2Q9NS61 270 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 HS3ST3B1Q9Y662 390 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 OTOL1A6NHN0 477 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 NRG2O14511 850 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 TOX4O94842 621 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 PIGYQ3MUY2 71 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 ADPRHL1Q8NDY3 354 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 NAT8BQ9UHF3 227 aa12.12□□□□□ -0.47
CLTCL1-201ENST00000412649 FREM3P0C091 2139 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 FAM166BA8MTA8 275 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 PAGE4O60829 102 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 GNG10P50151 68 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 SDF2L1Q9HCN8 221 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 FGF21Q9NSA1 209 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 A0A1B0GU03 582 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 TMEM211Q6ICI0 200 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 SPRED2Q7Z698 418 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 RARRES3Q9UL19 164 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 KIAA0895LQ68EN5 471 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 TGIF2LYQ8IUE0 185 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF664Q8N3J9 261 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF596Q8TC21 504 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 RBKSQ9H477 322 aa12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-201ENST00000412649 A8MWP6 167 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF217O75362 1048 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 HPRT1P00492 218 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 DRD1P21728 446 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 BMP5P22003 454 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 CDC34P49427 236 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 H2BFWTQ7Z2G1 175 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 CTXND1A0A1B0GTU2 59 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF17P17021 662 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 PRSS12P56730 875 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 ARSJQ5FYB0 599 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 SGMS2Q8NHU3 365 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 HEYLQ9NQ87 328 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 RPRMQ9NS64 109 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 AURKAIP1Q9NWT8 199 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF732B4DXR9 585 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 IGHMP01871 453 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 APLNRP35414 380 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 GABRA2P47869 451 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 LHFPL6Q9Y693 200 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 KBTBD11O94819 623 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 C16orf47Q6ZP98 133 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 OR10G8Q8NGN5 311 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 NAT6Q93015 286 aa12.1□□□□□ -0.47
CLTCL1-201ENST00000412649 A0A0A6YYD4 124 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 IGHV3-15A0A0B4J1V0 119 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 A0A1W2PR80 420 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 MS4A18H0YCH9 400 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 DEGS1O15121 323 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 DLEU1O43261 78 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 PPIHO43447 177 aaKnown RBP12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 HSBP1O75506 76 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 RAB7AP51149 207 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 MS4A18Q3C1V0 323 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 BTNL3Q6UXE8 466 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 MYPOPQ86VE0 399 aaPredicted RBP12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 OR1F12Q8NHA8 337 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 CPT1CQ8TCG5 803 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms