RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 A8MXK9 166 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 B4DSR2 109 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 CD3GP09693 182 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 MEF2CQ06413 473 aaPredicted RBP13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 AESQ08117 197 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 ARFRP1Q13795 201 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 EDDM3AQ14507 147 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 HACD4Q5VWC8 232 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 SLC35E4Q6ICL7 350 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 H1FXQ92522 213 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 CMSS1Q9BQ75 279 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 AUNIPQ9H7T9 357 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 ZMAT3Q9HA38 289 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 KCNS2Q9ULS6 477 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 MRPS7Q9Y2R9 242 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 KCNK7Q9Y2U2 307 aa13.67□□□□□ -0.22
TSPAN4-208ENST00000409531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.67□□□□□ -0.223e-9■■■□□ 18.5
TSPAN4-208ENST00000409531 TMEM30CPA0ZSE6 113 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 TMEM235A6NFC5 223 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 FABP12A6NFH5 140 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 POM121CA8CG34 1229 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 MELTFP08582 738 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 PTBP1P26599 531 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 P2RX3P56373 397 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 GNG2P59768 71 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 SEC61A1P61619 476 aaKnown RBP13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 RPL31P62899 125 aaKnown RBP13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 IL18Q14116 193 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 RSBN1Q5VWQ0 802 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 BTN2A1Q7KYR7 527 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 IZUMO1Q8IYV9 350 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 PLPPR1Q8TBJ4 325 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 COQ2Q96H96 371 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 DCTN5Q9BTE1 182 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 CHMP1AQ9HD42 196 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 C12orf4Q9NQ89 552 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 AK3Q9UIJ7 227 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 JMJD1CQ15652 2540 aa13.66□□□□□ -0.22
TSPAN4-208ENST00000409531 LOC105371242A0A075B767 164 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 A0A1W2PPH5 198 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 hADV38S2A0JD32 116 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 PHF1O43189 567 aaPredicted RBP13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 FCN3O75636 299 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 PYHIN1Q6K0P9 492 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 FAM131AQ6UXB0 335 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 CCDC190Q86UF4 302 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 GAPTQ8N292 157 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 DTX3Q8N9I9 347 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 C8orf46Q8TAG6 207 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 DMRTB1Q96MA1 342 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 ING3Q9NXR8 418 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 OR6C3Q9NZP0 311 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 KIF25Q9UIL4 384 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 CDC42EP3Q9UKI2 254 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 MGAT4AQ9UM21 535 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 POLR3KQ9Y2Y1 108 aaPredicted RBP13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 WNK2Q9Y3S1 2297 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 ARHGAP32A7KAX9 2087 aa13.65□□□□□ -0.22
TSPAN4-208ENST00000409531 MEIKINA0A087WXM9 373 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 A0A1W2PQ09 198 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 ODAMA1E959 279 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 FAM157AC9JC47 383 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 NAPSAO96009 420 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 HLA-DQB1P01920 261 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 MT-ND4P03905 459 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 PRSS3P35030 304 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 ETV6P41212 452 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 CBX5P45973 191 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 GLIPR1P48060 266 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 MRPS10P82664 201 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 CHRFAM7AQ494W8 412 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 OLFML2AQ68BL7 652 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 TRAT1Q6PIZ9 186 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 MOB1BQ7L9L4 216 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 FGFRL1Q8N441 504 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF565Q8N9K5 539 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 S100ZQ8WXG8 99 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 SCPEP1Q9HB40 452 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 RPUSD1Q9UJJ7 312 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 TRAPPC2LQ9UL33 140 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 LINC00312Q9Y6C7 94 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 TRGV10A0A0A0MS01 117 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 TRBV6-6A0A0A6YYG2 114 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 A0A0G2JMP0 313 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 A0A0X1KG70 313 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 KIAA1324LA8MWY0 1029 aaPredicted RBP13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 SULT1C2O00338 296 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 ENSAO43768 121 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 LIPFP07098 398 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 DTYMKP23919 212 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 DVL1P1P54792 670 aaPredicted RBP13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 LCN2P80188 198 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 RTN4RL2Q86UN3 420 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 SNX29P2Q8IUI4 249 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 TPRX1Q8N7U7 411 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 OR4M2Q8NGB6 313 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 DYRK2Q92630 601 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 BEX2Q9BXY8 128 aa13.64□□□□□ -0.23
TSPAN4-208ENST00000409531 UBE2J1Q9Y385 318 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms