RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 IGKV1-6A0A0C4DH72 117 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 KIR2DS1A0A191URI9 304 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 SULT1A3P0DMM9 295 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 SULT1A4P0DMN0 295 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 PI3P19957 117 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 FCGR2CP31995 323 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 KIR2DS4P43632 304 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 UBE2MP61081 183 aaKnown RBP11.78□□□□□ -0.52
GPNMB-203ENST00000409458 KIR2DS1Q14954 304 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 C11orf91Q3C1V1 193 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 DHRS11Q6UWP2 260 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 MOB1BQ7L9L4 216 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
GPNMB-203ENST00000409458 ASCC1Q8N9N2 400 aaKnown RBP11.78□□□□□ -0.52
GPNMB-203ENST00000409458 FAM222BQ8WU58 562 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 EGLN1Q9GZT9 426 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 SHARPINQ9H0F6 387 aa11.78□□□□□ -0.52
GPNMB-203ENST00000409458 ROS1P08922 2347 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 TMEM30CPA0ZSE6 113 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 H7C1Q1 480 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 ZNF737O75373 536 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 IRF2P14316 349 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 PGAM2P15259 253 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 CXCL3P19876 107 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 NFYAP23511 347 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-203ENST00000409458 GABRA2P47869 451 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 PPP1R1AQ13522 171 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 STUMQ69YW2 141 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 ZNF431Q8TF32 576 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-203ENST00000409458 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 DMRTB1Q96MA1 342 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 MS4A5Q9H3V2 200 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 SEBOXQ9HB31 216 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-203ENST00000409458 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.53
GPNMB-203ENST00000409458 BET1O15155 118 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
GPNMB-203ENST00000409458 IGFBP2P18065 325 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 AADACP22760 399 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 ZBTB25P24278 435 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 GLP1RP43220 463 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 SEC61A1P61619 476 aaKnown RBP11.76□□□□□ -0.53
GPNMB-203ENST00000409458 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
GPNMB-203ENST00000409458 AESQ08117 197 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 DHRS2Q13268 280 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 SURF2Q15527 256 aaPredicted RBP11.76□□□□□ -0.53
GPNMB-203ENST00000409458 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
GPNMB-203ENST00000409458 CABLES2Q9BTV7 478 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 MBNL3Q9NUK0 354 aaKnown RBP11.76□□□□□ -0.53
GPNMB-203ENST00000409458 SLC23A1Q9UHI7 598 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 PKDREJQ9NTG1 2253 aa11.76□□□□□ -0.53
GPNMB-203ENST00000409458 A0A1B0GW55 424 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 POM121CA8CG34 1229 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4L2P0CJ85 424 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4L3P0CJ86 424 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4L4P0CJ87 422 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4L5P0CJ88 424 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4L6P0CJ89 424 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4L7P0CJ90 424 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 AKR1C4P17516 323 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 ECI1P42126 302 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 KCNJ3P48549 501 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 EIF2B2P49770 351 aaKnown RBP11.75□□□□□ -0.53
GPNMB-203ENST00000409458 TAS2R31P59538 309 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 FXYD4P59646 89 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 HMGN3Q15651 99 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 KRBOX4Q5JUW0 171 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 TEX36Q5VZQ5 186 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 FAHD2BQ6P2I3 314 aaPredicted RBP11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4L9Q6RFH8 374 aaPredicted RBP11.75□□□□□ -0.53
GPNMB-203ENST00000409458 TPRX1Q8N7U7 411 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 OR4A4PQ8NGN8 299 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 MOB3AQ96BX8 217 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 FAHD2AQ96GK7 314 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 KIRREL1Q96J84 757 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 SCGB3A2Q96PL1 93 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DUX4Q9UBX2 424 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 KIF25Q9UIL4 384 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DSCAMO60469 2012 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 A0A1W2PPR1 153 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 C9orf170A2RU37 121 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 OOEPA6NGQ2 149 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 LRRC30A6NM36 301 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 PPYP01298 95 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 RNF224P0DH78 156 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 SELLP14151 372 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 LYG2Q86SG7 212 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 TCTE3Q8IZS6 198 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 DEFB108BQ8NET1 73 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 TMEM185AQ8NFB2 350 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 UBALD1Q8TB05 177 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 TOMM40LQ969M1 308 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 MGAT4CQ9UBM8 478 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 MGAT4AQ9UM21 535 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 MAB21L2Q9Y586 359 aa11.75□□□□□ -0.53
GPNMB-203ENST00000409458 MEIKINA0A087WXM9 373 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms