RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MRPL22Q9NWU5 206 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 EHFQ9NZC4 300 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 FOXJ2Q9P0K8 574 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 HSPB7Q9UBY9 170 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC7A11Q9UPY5 501 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC17A4Q9Y2C5 497 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 SPACA6W5XKT8 324 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 A0A1W2PQM1 296 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 OR6C6A6NF89 314 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 F6UZH7 168 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 TLX3O43711 291 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 OR6A2O95222 327 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 IFNA1P01562 189 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 BGLAPP02818 100 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 PI3P19957 117 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 APOBEC3AP31941 199 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 PTTG1IPP53801 180 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 TAS2R30P59541 319 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 CSNK2A1P68400 391 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 PRSS8Q16651 343 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 WDR25Q64LD2 544 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 VN1R4Q7Z5H5 301 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 MRGPRGQ86SM5 289 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 CSNK2A3Q8NEV1 391 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 TM2D1Q9BX74 207 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC45A2Q9UMX9 530 aa9.23□□□□□ -0.93
NIF3L1-204ENST00000409357 DUXBA0A1W2PPF3 345 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 PRR19A6NJB7 356 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 TMEM250H0YL14 139 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 SCDO00767 359 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 RAD51DO75771 328 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 VENTXO95231 258 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 EML2O95834 649 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 MT-ATP6P00846 226 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 CSTAP01040 98 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC35E2P0CK97 266 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 CD99P14209 185 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 ZNF93P35789 620 aaPredicted RBP9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 DUSP3P51452 185 aaPredicted RBP9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 UBE2G2P60604 165 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 P2RY6Q15077 328 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 MPV17LQ2QL34 196 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 LCN10Q6JVE6 187 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 C20orf196Q8IYI0 205 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 CMTM1Q8IZ96 169 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 OR4B1Q8NGF8 309 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 SSC4DQ8WTU2 575 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 PPP1R14AQ96A00 147 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 SPIN2AQ99865 258 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 SPIN2BQ9BPZ2 258 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 TIMM29Q9BSF4 260 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 TMEM59Q9BXS4 323 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 MOB1AQ9H8S9 216 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 CHODLQ9H9P2 273 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 CALHM2Q9HA72 323 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 DKK4Q9UBT3 224 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 LAMP3Q9UQV4 416 aa9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 FASNP49327 2511 aaKnown RBP9.22□□□□□ -0.93
NIF3L1-204ENST00000409357 GCN1Q92616 2671 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 H7BYZ3 331 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 NTN3O00634 580 aaPredicted RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 CCL25O15444 150 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 SOCS1O15524 211 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 DBHP09172 617 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 MMP7P09237 267 aaPredicted RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 ZNF888P0CJ79 500 aaPredicted RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 GALR1P47211 349 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 RPL27P61353 136 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 RAB11AP62491 216 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 CCL7P80098 99 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 ARFRP1Q13795 201 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 RTP5Q14D33 572 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 TPTE2P1Q5T6R2 138 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 ZNF880Q6PDB4 577 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 OGFOD3Q6PK18 319 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 ZFP62Q8NB50 900 aaPredicted RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 OR2T10Q8NGZ9 312 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 OR2V1Q8NHB1 315 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 NAT6Q93015 286 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 MSI2Q96DH6 328 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 THOC3Q96J01 351 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC46A1Q96NT5 459 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 ALKBH3Q96Q83 286 aaPredicted RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 OR10A2Q9H208 303 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 SLC2A9Q9NRM0 540 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 PRSS50Q9UI38 385 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 RCL1Q9Y2P8 373 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 MRPS28Q9Y2Q9 187 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 EMC9Q9Y3B6 208 aa9.21□□□□□ -0.93
NIF3L1-204ENST00000409357 PIGBOS1A0A0B4J2F0 54 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 KBTBD11O94819 623 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 SCGB1D2O95969 90 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 IGKV1D-16P01601 117 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 GZMHP20718 246 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ARR3P36575 388 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 RPL15P61313 204 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 DCAF7P61962 342 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ARF6P62330 175 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms