RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 NSDHLQ15738 373 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 LCN10Q6JVE6 187 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 DOK3Q7L591 496 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 NOXO1Q8NFA2 376 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 DNASE2BQ8WZ79 361 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 DDIT4LQ96D03 193 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 NSG2Q9Y328 171 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 PCNX3Q9H6A9 2034 aa14.07□□□□□ -0.16
COL4A3BP-204ENST00000405807 IGHV5-51A0A0C4DH38 117 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 CTSDP07339 412 aaPredicted RBP14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 ZNF121P58317 390 aaPredicted RBP14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 RANP62826 216 aaKnown RBP14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 PECRQ9BY49 303 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 KLHL13Q9P2N7 655 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 STRAPQ9Y3F4 350 aaKnown RBP14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 LHFPL6Q9Y693 200 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 DOCK8Q8NF50 2099 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 GNG7O60262 68 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 TRAPPC6AO75865 159 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 ZNF17P17021 662 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 MOB3AQ96BX8 217 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 CDH20Q9HBT6 801 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 HSF4Q9ULV5 492 aa14.06□□□□□ -0.16
COL4A3BP-204ENST00000405807 SPTBN5Q9NRC6 3674 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 TRAV26-1A0A087WT03 109 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 CRYM-AS1A6NIL9 109 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 PRH1P02810 166 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 HPNP05981 417 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 IGHV4-34P06331 123 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 CCL1P22362 96 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 HYAL1Q12794 435 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 P2RY6Q15077 328 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 TMEM92Q6UXU6 159 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 SNIP1Q8TAD8 396 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 SSC4DQ8WTU2 575 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 FAM222BQ8WU58 562 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 MRPL24Q96A35 216 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 ZNF319Q9P2F9 582 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 FOXI3A8MTJ6 420 aaPredicted RBP14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 CORTO00230 105 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 ERVS71-1P61550 626 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 SLC35A1P78382 337 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 VAMP3Q15836 100 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 ZNF441Q8N8Z8 693 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 IGKV1-9A0A0C4DH69 117 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 PSG1P11464 419 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 FUT3P21217 361 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 P2RY1P47900 373 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 GFERP55789 205 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 CLRN1P58418 232 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 KISS1Q15726 138 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 HIKESHIQ53FT3 197 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 GPR157Q5UAW9 335 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 TMEM186Q96B77 213 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 ANGPTL4Q9BY76 406 aa14.05□□□□□ -0.16
COL4A3BP-204ENST00000405807 TLCD2A6NGC4 264 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 GPR137BO60478 399 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 FASLGP48023 281 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 EIF3IQ13347 325 aaKnown RBP14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 PRAMEF5Q5TYX0 476 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 PRAMEF6Q5VXH4 476 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 TOMM20LQ6UXN7 152 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 FBXW12Q6X9E4 464 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 SYT13Q7L8C5 426 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 OR4S2Q8NH73 311 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 NUDT22Q9BRQ3 303 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 LRRC61Q9BV99 259 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 ALKBH4Q9NXW9 302 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 A0A1W2PNV4 684 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 LIPT2A6NK58 231 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 H0YL77 283 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 MRPS21P82921 87 aaKnown RBP14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 SNAI3Q3KNW1 292 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 LFNGQ8NES3 379 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 GPR146Q96CH1 333 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 CYP8B1Q9UNU6 501 aa14.04□□□□□ -0.16
COL4A3BP-204ENST00000405807 C2orf72A6NCS6 295 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 ZNF814B7Z6K7 855 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 CA3P07451 260 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 CEACAM3P40198 252 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 IGF2-ASQ6U949 168 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 FAM57BQ71RH2 274 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 C1QL2Q7Z5L3 287 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 CHRNA10Q9GZZ6 450 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 GABRG2P18507 467 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 BMP5P22003 454 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 RPS20P60866 119 aaKnown RBP14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 ENDOGQ14249 297 aaKnown RBP14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 TMEM183BQ1AE95 376 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 MORN2Q502X0 79 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 C9orf50Q5SZB4 431 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 TMEM144Q7Z5S9 345 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 TM2D1Q9BX74 207 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 SMDT1Q9H4I9 107 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 WFDC1Q9HC57 220 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 VDAC3Q9Y277 283 aa14.03□□□□□ -0.16
COL4A3BP-204ENST00000405807 LAMTOR2Q9Y2Q5 125 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms