RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 C8orf46Q8TAG6 207 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 CCDC107Q8WV48 283 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 DACT3Q96B18 629 aaPredicted RBP27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 C18orf12Q96KH6 178 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 SVEP1Q4LDE5 3571 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 SERPINE3A8MV23 424 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 CA11O75493 328 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 TGFAP01135 160 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 GSTP1P09211 210 aaKnown RBP27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 S100A5P33763 92 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 TALDO1P37837 337 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 GAPTQ8N292 157 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 CMSS1Q9BQ75 279 aaKnown RBP27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 AUNIPQ9H7T9 357 aa27.46■■□□□ 1.99
CSNK1E-204ENST00000403904 IGHV2-70DA0A0C4DH43 119 aa27.45■■□□□ 1.99
CSNK1E-204ENST00000403904 MEF2CQ06413 473 aaPredicted RBP27.45■■□□□ 1.99
CSNK1E-204ENST00000403904 ARFRP1Q13795 201 aa27.45■■□□□ 1.99
CSNK1E-204ENST00000403904 ZNF273Q14593 569 aa27.45■■□□□ 1.99
CSNK1E-204ENST00000403904 CYB5R2Q6BCY4 276 aa27.45■■□□□ 1.99
CSNK1E-204ENST00000403904 TCF23Q7RTU1 214 aa27.45■■□□□ 1.99
CSNK1E-204ENST00000403904 WDFY2Q96P53 400 aa27.45■■□□□ 1.99
CSNK1E-204ENST00000403904 hADV38S2A0JD32 116 aa27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 ENSAO43768 121 aaKnown RBP27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 MNDAP41218 407 aa27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 HACD4Q5VWC8 232 aa27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 MRPL30Q8TCC3 161 aaKnown RBP27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 CHMP1AQ9HD42 196 aaPredicted RBP27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 HIF1ANQ9NWT6 349 aa27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 PTTG2Q9NZH5 202 aa27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 CSPG4Q6UVK1 2322 aa27.44■■□□□ 1.98
CSNK1E-204ENST00000403904 NAPSAO96009 420 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 HLA-DQB1P01920 261 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 CD3GP09693 182 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 ZNF16P17020 682 aaPredicted RBP27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 TRAPPC6BQ86SZ2 158 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 OR6Q1Q8NGQ2 317 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 OR13A1Q8NGR1 328 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 TMEM186Q96B77 213 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 KIR2DS1A0A191URI9 304 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 LIPFP07098 398 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 INHBBP09529 407 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 MRPS15P82914 257 aaKnown RBP27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 NUDCD2Q8WVJ2 157 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 TMUB1Q9BVT8 246 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 NCOR1P1Q9H4R4 102 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 C12orf4Q9NQ89 552 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 LPAR3Q9UBY5 353 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 TRAPPC2LQ9UL33 140 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 LINC00312Q9Y6C7 94 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 HIVEP1P15822 2718 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 MAST4O15021 2626 aa27.43■■□□□ 1.98
CSNK1E-204ENST00000403904 TRGV10A0A0A0MS01 117 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 TRAV20A0A0B4J274 112 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 CCL3L1P16619 93 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 GLP1RP43220 463 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 PNLIPRP3Q17RR3 467 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 Q6ZPA2 131 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 MRGPRDQ8TDS7 321 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 GCDHQ92947 438 aaPredicted RBP27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 OR6C3Q9NZP0 311 aa27.42■■□□□ 1.98
CSNK1E-204ENST00000403904 MELTFP08582 738 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 CD99P14209 185 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 RCC1P18754 421 aaPredicted RBP27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 GNG2P59768 71 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 BTNL3Q6UXE8 466 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 GLCCI1Q86VQ1 547 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 SNX29P2Q8IUI4 249 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 ZNF565Q8N9K5 539 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 ONECUT1Q9UBC0 465 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 INSIG2Q9Y5U4 225 aa27.41■■□□□ 1.98
CSNK1E-204ENST00000403904 SETD6Q8TBK2 473 aa27.4■■□□□ 1.98
CSNK1E-204ENST00000403904 CORO2AQ92828 525 aa27.4■■□□□ 1.98
CSNK1E-204ENST00000403904 RIMS4Q9H426 269 aaPredicted RBP27.4■■□□□ 1.98
CSNK1E-204ENST00000403904 DVL1P1P54792 670 aaPredicted RBP27.39■■□□□ 1.98
CSNK1E-204ENST00000403904 ARF6P62330 175 aa27.39■■□□□ 1.98
CSNK1E-204ENST00000403904 KRTAP1-1Q07627 177 aa27.39■■□□□ 1.98
CSNK1E-204ENST00000403904 DCAF12L2Q5VW00 463 aa27.39■■□□□ 1.98
CSNK1E-204ENST00000403904 UBE2J1Q9Y385 318 aaPredicted RBP27.39■■□□□ 1.98
CSNK1E-204ENST00000403904 A0A0G2JMP0 313 aa27.39■■□□□ 1.97
CSNK1E-204ENST00000403904 A0A0X1KG70 313 aa27.39■■□□□ 1.97
CSNK1E-204ENST00000403904 SSX5O60225 188 aa27.39■■□□□ 1.97
CSNK1E-204ENST00000403904 OR4M2Q8NGB6 313 aa27.39■■□□□ 1.97
CSNK1E-204ENST00000403904 ZNF714Q96N38 554 aa27.39■■□□□ 1.97
CSNK1E-204ENST00000403904 TLN2Q9Y4G6 2542 aa27.38■■□□□ 1.97
CSNK1E-204ENST00000403904 GUCA2AQ02747 115 aa27.38■■□□□ 1.97
CSNK1E-204ENST00000403904 IL18Q14116 193 aa27.38■■□□□ 1.97
CSNK1E-204ENST00000403904 ABHD1Q96SE0 405 aa27.38■■□□□ 1.97
CSNK1E-204ENST00000403904 SMR3AQ99954 134 aa27.38■■□□□ 1.97
CSNK1E-204ENST00000403904 MBNL3Q9NUK0 354 aaKnown RBP27.38■■□□□ 1.97
CSNK1E-204ENST00000403904 ZNF230Q9UIE0 474 aaPredicted RBP27.38■■□□□ 1.97
CSNK1E-204ENST00000403904 A0A1W2PPH5 198 aa27.37■■□□□ 1.97
CSNK1E-204ENST00000403904 FABP12A6NFH5 140 aa27.37■■□□□ 1.97
CSNK1E-204ENST00000403904 ZNF728P0DKX0 622 aa27.37■■□□□ 1.97
CSNK1E-204ENST00000403904 ERVFRD-1P60508 538 aa27.37■■□□□ 1.97
CSNK1E-204ENST00000403904 PITPNAQ00169 270 aa27.37■■□□□ 1.97
CSNK1E-204ENST00000403904 CCDC190Q86UF4 302 aa27.37■■□□□ 1.97
CSNK1E-204ENST00000403904 TRBV6-6A0A0A6YYG2 114 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 MEIOCA2RUB1 952 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 FCGR3AP08637 254 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms