RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 TMED9Q9BVK6 235 aa2.89□□□□□ -1.95
CCDC178-204ENST00000403303 RAB22AQ9UL26 194 aa2.89□□□□□ -1.95
CCDC178-204ENST00000403303 SHROOM3Q8TF72 1996 aa2.89□□□□□ -1.95
CCDC178-204ENST00000403303 BPTFQ12830 3046 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 MYBPHLA2RUH7 354 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 H3BNH8 94 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CELP19835 753 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CD52P31358 61 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 OMPP47874 163 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 DIO3P55073 304 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 RANP62826 216 aaKnown RBP2.88□□□□□ -1.95
CCDC178-204ENST00000403303 FAM19A3Q7Z5A8 133 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 MUC15Q8N387 334 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 IQCF1Q8N6M8 205 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 OR1J4Q8NGS1 313 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 NT5CQ8TCD5 201 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 MRGPRDQ8TDS7 321 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 RBPMSQ93062 196 aaKnown RBP2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CIDECQ96AQ7 238 aaPredicted RBP2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CALN1Q9BXU9 219 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 ZNF430Q9H8G1 570 aaPredicted RBP2.88□□□□□ -1.95
CCDC178-204ENST00000403303 HEXA-AS1Q9H8Q6 139 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 SLC25A22Q9H936 323 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 RWDD2AQ9UIY3 292 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 GMNCA6NCL1 334 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 AMBPP02760 352 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 IFNA16P05015 189 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 SEC11BP0C7V7 166 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 PGAM2P15259 253 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 ORM2P19652 201 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 TSPOP30536 169 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 RPL32P62910 135 aaKnown RBP2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CDK5Q00535 292 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 GINS1Q14691 196 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 TMED2Q15363 201 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 KRTAP15-1Q3LI76 137 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 ZNF506Q5JVG8 444 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 TMEM236Q5W0B7 351 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CD177Q8N6Q3 437 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 OR2D3Q8NGH3 330 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 RHOXF1Q8NHV9 184 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CYGBQ8WWM9 190 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 EBF4Q9BQW3 602 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CXCL16Q9H2A7 254 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 CISHQ9NSE2 258 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 ARL2BPQ9Y2Y0 163 aa2.88□□□□□ -1.95
CCDC178-204ENST00000403303 BAZ2BQ9UIF8 2168 aaKnown RBP2.88□□□□□ -1.95
CCDC178-204ENST00000403303 A0A1W2PS18 150 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 CLDN34H7C241 214 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 NPIPB7O75200 414 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 ZNF432O94892 652 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 APOEP02649 317 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 CHTF8P0CG12 524 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SLC2A1P11166 492 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 VHLP40337 213 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 ZNF138P52744 262 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 OR4D2P58180 307 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SRSF6Q13247 344 aaKnown RBP2.87□□□□□ -1.95
CCDC178-204ENST00000403303 CDK10Q15131 360 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 KLF17Q5JT82 389 aaPredicted RBP2.87□□□□□ -1.95
CCDC178-204ENST00000403303 TCF23Q7RTU1 214 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 DPPA2Q7Z7J5 298 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 CALHM3Q86XJ0 350 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 PDPNQ86YL7 162 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 C11orf72Q8NBR9 251 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 OR5AK3PQ8NH89 298 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 FLVCR1-AS1Q8TAF5 88 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 TNFAIP8L1Q8WVP5 186 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 TAF15Q92804 592 aaKnown RBP eCLIP2.87□□□□□ -1.95
CCDC178-204ENST00000403303 S100PBPQ96BU1 408 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SMIM8Q96KF7 97 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SOSTQ9BQB4 213 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 C20orf85Q9H1P6 137 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SIGLEC7Q9Y286 467 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 ZNF407Q9C0G0 2248 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 MN1Q10571 1320 aaPredicted RBP2.87□□□□□ -1.95
CCDC178-204ENST00000403303 DNAH6Q9C0G6 4158 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 FAM236DA0A1B0GTK5 79 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SMIM9A6NGZ8 99 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 DISC1C4P0D8 188 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 NDUFS5O43920 106 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SUPT3HO75486 399 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SLPIP03973 132 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 FAM236CP0DP71 79 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 CCR7P32248 378 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 RCVRNP35243 200 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 MYCNOSP40205 109 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 PPOXP50336 477 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 CCR6P51684 374 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 TPI1P60174 286 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 NSDHLQ15738 373 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 TCEAL5Q5H9L2 206 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 RBM48Q5RL73 367 aaKnown RBP2.87□□□□□ -1.95
CCDC178-204ENST00000403303 SPNS3Q6ZMD2 512 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 Q6ZSR6 202 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 CPNE9Q8IYJ1 553 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 C20orf203Q8NBC4 194 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 RTBDNQ9BSG5 229 aaPredicted RBP2.87□□□□□ -1.95
CCDC178-204ENST00000403303 ULBP3Q9BZM4 244 aa2.87□□□□□ -1.95
CCDC178-204ENST00000403303 Q9H3A6 140 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms