RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 CLDN18P56856 261 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 PABPC1L2AQ5JQF8 200 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 TMEM204Q9BSN7 226 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 PLPP3O14495 311 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 RHBDL1O75783 438 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 CTSDP07339 412 aaPredicted RBP11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 SCGB1A1P11684 91 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 SSPNQ14714 243 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 IZUMO4Q1ZYL8 232 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 DHRS13Q6UX07 377 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR10D3Q8NH80 312 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 GLRX2Q9NS18 164 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 FZR1Q9UM11 496 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 MED12Q93074 2177 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 SPTY2D1-AS1A0A0U1RR47 76 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 SMPD2O60906 423 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 SPINK9Q5DT21 86 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF770Q6IQ21 691 aaPredicted RBP11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 MSL2Q9HCI7 577 aa11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF256Q9Y2P7 627 aaPredicted RBP11.88□□□□□ -0.51
LDLRAD4-203ENST00000399848 PRICKLE4Q2TBC4 344 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 WIPI1Q5MNZ9 446 aaPredicted RBP11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 CST9Q5W186 159 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 RFESDQ8TAC1 157 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 COA4Q9NYJ1 87 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 PITPNC1Q9UKF7 332 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 TNRC6CQ9HCJ0 1690 aaKnown RBP11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 LOC102724200A0A096LPH7 203 aaPredicted RBP11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 LRRC29Q8WV35 223 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 LOXL4Q96JB6 756 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 PCNX1Q96RV3 2341 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 KCNE1BA0A087WTH5 132 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 APCSP02743 223 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 CSN3P07498 182 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 UQCRFS1P47985 274 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 LINC00596Q86U02 117 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR6X1Q8NH79 312 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 R3HDM4Q96D70 268 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 MOGAT1Q96PD6 335 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 TMPRSS2O15393 492 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 TBX19O60806 448 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 VDAC1P21796 283 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 RELBQ01201 579 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 MRGPRDQ8TDS7 321 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 GPR27Q9NS67 375 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 SH2D5Q6ZV89 423 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 SYNGR2O43760 224 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 MRPL58Q14197 206 aaKnown RBP11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 FAM219AQ8IW50 185 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR4A8P0C604 315 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 PRR35P0CG20 571 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 SUCLG1P53597 346 aaKnown RBP11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 SLC35B1P78383 322 aa11.87□□□□□ -0.51
LDLRAD4-203ENST00000399848 K7ERU9 68 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 DLK1P80370 383 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 PSG5Q15238 335 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 TNXAQ16473 311 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 MRGPRGQ86SM5 289 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF683Q8IZ20 524 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 SNRNP40Q96DI7 357 aaKnown RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 TSPAN32Q96QS1 320 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 ACTL6AO96019 429 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 YBX1P67809 324 aaKnown RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR1N2Q8NGR9 330 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 MNX1P50219 401 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR4D9Q8NGE8 314 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 PRDM7Q9NQW5 492 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 KIR2DL1P43626 348 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 KIR2DL2P43627 348 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 PF4P02776 101 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR8A1Q8NGG7 326 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 SLC25A17O43808 307 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 RAE1P78406 368 aaKnown RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 SKP2Q13309 424 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 COPS9Q8WXC6 57 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 PRNDQ9UKY0 176 aa11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD4-203ENST00000399848 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 SMDT1Q9H4I9 107 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 OR8I2Q8N0Y5 310 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 BVESQ8NE79 360 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 Q8WTZ3 238 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 CES1P1Q9UKY3 287 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.512e-7■■□□□ 11.4
LDLRAD4-203ENST00000399848 NOTCH3Q9UM47 2321 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 COX7A1P24310 79 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 POLR2GP62487 172 aaKnown RBP eCLIP11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 F2RL2O00254 374 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 SRD5A2P31213 254 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 AMMECR1LQ6DCA0 310 aa11.85□□□□□ -0.51
LDLRAD4-203ENST00000399848 ZNF441Q8N8Z8 693 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms