RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 OR5C1Q8NGR4 320 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 PLPPR1Q8TBJ4 325 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BHQ93079 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 TECTBQ96PL2 329 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BNQ99877 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BMQ99879 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 SF3B5Q9BWJ5 86 aaKnown RBP11.46□□□□□ -0.57
TRIM40-207ENST00000396581 PROK2Q9HC23 129 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 PCNX2A6NKB5 2137 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 ELOA3CA0A087WX78 387 aaPredicted RBP11.45□□□□□ -0.58
TRIM40-207ENST00000396581 LOC102723996A0A087X1L8 192 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 IGHV3-15A0A0B4J1V0 119 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 ZIC3O60481 467 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 TMEM50AO95807 157 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 HBE1P02100 147 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 EPHA1P21709 976 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 UCP1P25874 307 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 DSCR4P56555 118 aaPredicted RBP11.45□□□□□ -0.58
TRIM40-207ENST00000396581 CD81P60033 236 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 RNPS1Q15287 305 aaKnown RBP11.45□□□□□ -0.58
TRIM40-207ENST00000396581 OR8G1Q15617 311 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 TBC1D26Q86UD7 250 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF695Q8IW36 515 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 SLAMF9Q96A28 289 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 NIPSNAP3BQ9BS92 247 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 PRDM13Q9H4Q3 707 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 DNPH1O43598 174 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 LIFP15018 202 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 HIST1H1BP16401 226 aaKnown RBP11.45□□□□□ -0.58
TRIM40-207ENST00000396581 DYNLT3P51808 116 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 RND2P52198 227 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 TAS2R30P59541 319 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 FOXO1Q12778 655 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 CXorf66Q5JRM2 361 aaPredicted RBP11.45□□□□□ -0.58
TRIM40-207ENST00000396581 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF774Q6NX45 483 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 HIST3H2BBQ8N257 126 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 STRADBQ9C0K7 418 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 SH2D2AQ9NP31 389 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 TMEM9BQ9NQ34 198 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 SLC7A10Q9NS82 523 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 FAM86C1Q9NVL1 165 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 TMEM38BQ9NVV0 291 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 RNF115Q9Y4L5 304 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 HS3ST3B1Q9Y662 390 aa11.45□□□□□ -0.58
TRIM40-207ENST00000396581 C9J4A7 227 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 TGOLN2O43493 480 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 SSSCA1O60232 199 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 UMODP07911 640 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 VDAC1P21796 283 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 GPX4P36969 197 aaPredicted RBP11.44□□□□□ -0.58
TRIM40-207ENST00000396581 TLE4Q04727 773 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 IL24Q13007 206 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF674Q2M3X9 581 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 CDCP2Q5VXM1 449 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 SPNS3Q6ZMD2 512 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 ZPBPQ9BS86 351 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 SLC7A11Q9UPY5 501 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 UBE2J1Q9Y385 318 aaPredicted RBP11.44□□□□□ -0.58
TRIM40-207ENST00000396581 LOXL2Q9Y4K0 774 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 ARID1AO14497 2285 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 AHCTF1Q8WYP5 2266 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 TGIF2-C20orf24A0A0A6YYL0 155 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 A0A0J9YW62 118 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 PHOX2AO14813 284 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 ADAM20O43506 726 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 TUSC2O75896 110 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 NAPSAO96009 420 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 LCATP04180 440 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 NPBWR2P48146 333 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 PAX9P55771 341 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 RAC1P63000 192 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 VAMP2P63027 116 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 PCOLCEQ15113 449 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 AKR1C8PQ5T2L2 129 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 IL22RA1Q8N6P7 574 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF383Q8NA42 475 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 OR2Y1Q8NGV0 311 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 CPT1CQ8TCG5 803 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 RCC1LQ96I51 464 aaKnown RBP11.44□□□□□ -0.58
TRIM40-207ENST00000396581 ATP5SQ99766 215 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF700Q9H0M5 742 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 Q9N2K0 584 aa11.44□□□□□ -0.58
TRIM40-207ENST00000396581 OMGP23515 440 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 HLA-DRB3P79483 266 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 PNRC1Q12796 327 aaPredicted RBP11.43□□□□□ -0.58
TRIM40-207ENST00000396581 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF818PQ6ZRF7 136 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 SPSB4Q96A44 273 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 PFDN5Q99471 154 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 SRXN1Q9BYN0 137 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF442Q9H7R0 627 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 CALHM2Q9HA72 323 aa11.43□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF816-ZNF321PA0A0X1KG74 233 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms