RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TMEM37Q8WXS4 190 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 PHF7Q9BWX1 381 aaPredicted RBP12.33□□□□□ -0.44
CLIP2-203ENST00000395060 OR51B6Q9H340 312 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 LAMP3Q9UQV4 416 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 DOCK11Q5JSL3 2073 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 AQP7P3A6NL99 342 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 CNOT4O95628 575 aaKnown RBP12.33□□□□□ -0.44
CLIP2-203ENST00000395060 DEFA4P12838 97 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 FOSL1P15407 271 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF92Q03936 586 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 P2RY6Q15077 328 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 Q3ZCU0 254 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF787Q6DD87 383 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 NFAM1Q8NET5 270 aaPredicted RBP12.33□□□□□ -0.44
CLIP2-203ENST00000395060 ZDBF2Q9HCK1 2354 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 NPIPB13A6NJU9 1138 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 NPIPB4C9JG80 1138 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 LMO7DNF2Z398 122 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 PITX3O75364 302 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 PTBP3O95758 552 aaKnown RBP12.33□□□□□ -0.44
CLIP2-203ENST00000395060 TCN2P20062 427 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 SELENOHQ8IZQ5 122 aaKnown RBP12.33□□□□□ -0.44
CLIP2-203ENST00000395060 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 NABP1Q96AH0 204 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 RASL10BQ96S79 203 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 TMEM222Q9H0R3 208 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 BCO1Q9HAY6 547 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 FSCN3Q9NQT6 498 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF32P17041 273 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 LMO1P25800 156 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 SLC23A3Q6PIS1 610 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 REC114Q7Z4M0 266 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 KDF1Q8NAX2 398 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-203ENST00000395060 LURAP1Q96LR2 239 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 LYRM2Q9NU23 88 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-203ENST00000395060 A0A0U1RQV5 110 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 TLE4Q04727 773 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 OR8G1Q15617 311 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF611Q8N823 705 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 EXTL1Q92935 676 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 ELOVL1Q9BW60 279 aa12.32□□□□□ -0.44
CLIP2-203ENST00000395060 UBE2ZQ9H832 354 aaPredicted RBP12.32□□□□□ -0.44
CLIP2-203ENST00000395060 SLC31A2O15432 143 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 NTF4P34130 210 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 PKIAP61925 76 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF488Q96MN9 340 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 C10orf142B7Z368 130 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 HS3ST1O14792 307 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 SCRG1O75711 98 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 DECR2Q9NUI1 292 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 FREM1Q5H8C1 2179 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 CLDN34H7C241 214 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 PDCD6O75340 191 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 PIAS2O75928 621 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 ZFAND5O76080 213 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 IDH3GP51553 393 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-203ENST00000395060 COL10A1Q03692 680 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF124Q15973 351 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF506Q5JVG8 444 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 FAM90A2PQ658T7 463 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 YRDCQ86U90 279 aaKnown RBP12.31□□□□□ -0.44
CLIP2-203ENST00000395060 SLC25A45Q8N413 288 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 OR4X1Q8NH49 305 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 GPR87Q9BY21 358 aa12.31□□□□□ -0.44
CLIP2-203ENST00000395060 IFNA5P01569 189 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 TK1P04183 234 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
CLIP2-203ENST00000395060 DTYMKP23919 212 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 SUMO3P55854 103 aaPredicted RBP12.3□□□□□ -0.44
CLIP2-203ENST00000395060 CNN3Q15417 329 aaKnown RBP12.3□□□□□ -0.44
CLIP2-203ENST00000395060 HIST3H3Q16695 136 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 OR8G2PQ6IF36 304 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 RDH5Q92781 318 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 RBKSQ9H477 322 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 A0A1B0GUS0 222 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 IFNA10P01566 189 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 CCL3P10147 92 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 BCL3P20749 454 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 NXPH1P58417 271 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF66Q6ZN08 573 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 SGCZQ96LD1 299 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 CRIM1Q9NZV1 1036 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 RBM7Q9Y580 266 aaKnown RBP12.3□□□□□ -0.44
CLIP2-203ENST00000395060 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
CLIP2-203ENST00000395060 XKRY2A2RUG3 117 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 CD33P20138 364 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 MAML2Q8IZL2 1156 aaPredicted RBP12.29□□□□□ -0.44
CLIP2-203ENST00000395060 SCGB1C1Q8TD33 95 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 GATAD1Q8WUU5 269 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 SPACA9Q96E40 222 aaPredicted RBP12.29□□□□□ -0.44
CLIP2-203ENST00000395060 ANGPTL4Q9BY76 406 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 LOC102723971A0A1B0GUV8 181 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 EREGO14944 169 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 IGLV3-1P01715 115 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms