RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 SLC25A34Q6PIV7 304 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 OR1L1Q8NH94 360 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 OR2V1Q8NHB1 315 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 HIST1H2BAQ96A08 127 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 NPTNQ9Y639 398 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 MS4A18H0YCH9 400 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 H0YL77 283 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 ACP1P24666 158 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 MS4A18Q3C1V0 323 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 C8orf82Q6P1X6 216 aaPredicted RBP10.45□□□□□ -0.74
SYNPO-202ENST00000394243 ZNF502Q8TBZ5 544 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 MRPL18Q9H0U6 180 aaKnown RBP10.45□□□□□ -0.74
SYNPO-202ENST00000394243 ADTRPQ96IZ2 230 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 KNTC1P50748 2209 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 MPTX1A8MV57 137 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 CD74P04233 296 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 WFDC8Q8IUA0 241 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 OR8I2Q8N0Y5 310 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 OR11H4Q8NGC9 324 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 FGF14Q92915 247 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 SH2D7A6NKC9 451 aaPredicted RBP10.45□□□□□ -0.74
SYNPO-202ENST00000394243 CDS2O95674 445 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 FZD5Q13467 585 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 PARM1Q6UWI2 310 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 EID2BQ96D98 161 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 KLK13Q9UKR3 277 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 FZR1Q9UM11 496 aa10.45□□□□□ -0.74
SYNPO-202ENST00000394243 SCN3AQ9NY46 2000 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 ZNF32P17041 273 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 NHLRC3Q5JS37 347 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 LDLRAD1Q5T700 205 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 C6orf106Q9H6K1 298 aaPredicted RBP10.44□□□□□ -0.74
SYNPO-202ENST00000394243 TBX21Q9UL17 535 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 TMSB15BA0A087X1C1 80 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 PLPP3O14495 311 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 NDUFB4O95168 129 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 DSCR4P56555 118 aaPredicted RBP10.44□□□□□ -0.74
SYNPO-202ENST00000394243 RARRES2Q99969 163 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 LINC00587B1AMM8 73 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 M0QZ24 198 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 FCARP24071 287 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 LRRC10Q5BKY1 277 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 RSPO2Q6UXX9 243 aaPredicted RBP10.44□□□□□ -0.74
SYNPO-202ENST00000394243 NPEPL1Q8NDH3 523 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 OR2V2Q96R30 315 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 GPA33Q99795 319 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 SLC52A3Q9NQ40 469 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 MGPP08493 103 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 WNT5AP41221 380 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 YBX1P67809 324 aaKnown RBP10.44□□□□□ -0.74
SYNPO-202ENST00000394243 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 SAP30LQ9HAJ7 183 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 ID4P47928 161 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 ZNF766Q5HY98 468 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 ACER2Q5QJU3 275 aa10.44□□□□□ -0.74
SYNPO-202ENST00000394243 DHRS7CA6NNS2 312 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 HSPB1P04792 205 aaKnown RBP10.43□□□□□ -0.74
SYNPO-202ENST00000394243 ADIPOQQ15848 244 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 ZNF506Q5JVG8 444 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 HIST1H4GQ99525 98 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 ALX4Q9H161 411 aaPredicted RBP10.43□□□□□ -0.74
SYNPO-202ENST00000394243 SLC26A1Q9H2B4 701 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 ZFP64Q9NPA5 681 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 WIPI2Q9Y4P8 454 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 HIST1H1BP16401 226 aaKnown RBP10.43□□□□□ -0.74
SYNPO-202ENST00000394243 PRICKLE4Q2TBC4 344 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 TMEM136Q6ZRR5 245 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 OPN3Q9H1Y3 402 aaPredicted RBP10.43□□□□□ -0.74
SYNPO-202ENST00000394243 F11RQ9Y624 299 aaKnown RBP10.43□□□□□ -0.74
SYNPO-202ENST00000394243 CCL2P13500 99 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 ZADH2Q8N4Q0 377 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 OR10S1Q8NGN2 331 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 MVB12AQ96EY5 273 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 A0A1B0GU03 582 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 NDUFB3O43676 98 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 GFERP55789 205 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 C6orf15Q6UXA7 325 aaPredicted RBP10.43□□□□□ -0.74
SYNPO-202ENST00000394243 OR1N1Q8NGS0 311 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 OR4S2Q8NH73 311 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 ASB5Q8WWX0 329 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 MTCH2Q9Y6C9 303 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 B4E171 279 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 OR11G2Q8NGC1 345 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 TREM2Q9NZC2 230 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 J3KRW8 73 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 MT-CO3P00414 261 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 HBZP02008 142 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 NPBWR2P48146 333 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 SLC25A30Q5SVS4 291 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 C10orf113Q5VZT2 155 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 ST6GALNAC3Q8NDV1 305 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 TMEM38BQ9NVV0 291 aa10.43□□□□□ -0.74
SYNPO-202ENST00000394243 K7ESF4 209 aa10.42□□□□□ -0.74
SYNPO-202ENST00000394243 CD27P26842 260 aa10.42□□□□□ -0.74
SYNPO-202ENST00000394243 TGIF1Q15583 401 aa10.42□□□□□ -0.74
SYNPO-202ENST00000394243 OR4X1Q8NH49 305 aa10.42□□□□□ -0.74
SYNPO-202ENST00000394243 PERPQ96FX8 193 aa10.42□□□□□ -0.74
SYNPO-202ENST00000394243 ZBP1Q9H171 429 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms