RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 TEX46H3BTG2 121 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 WNT2P09544 360 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 ZNF44P15621 663 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 P2RY1P47900 373 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 OR8G1Q15617 311 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 ALKBH6Q3KRA9 238 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 C1QTNF12Q5T7M4 302 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 ZNF818PQ6ZRF7 136 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 CMTM1Q8IZ96 169 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 H1FOOQ8IZA3 346 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 SLC35G3Q8N808 338 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 OR8G5Q8NG78 346 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 OR4D5Q8NGN0 318 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 MBD3L2Q8NHZ7 208 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 SECTM1Q8WVN6 248 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 TMED6Q8WW62 240 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 IL22RA2Q969J5 263 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 STARD4Q96DR4 205 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 SAT2Q96F10 170 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 ZC4H2Q9NQZ6 224 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 IGKV1D-13A0A0B4J2D9 117 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 PIGBOS1A0A0B4J2F0 54 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 SH2D1BO14796 132 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 WDR1O75083 606 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 IGKV1-13P0DP09 117 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 KITLGP21583 273 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 UCP1P25874 307 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 TMEM268Q5VZI3 342 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 RPL7L1Q6DKI1 246 aaKnown RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 ZNF497Q6ZNH5 498 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 Q6ZS92 163 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 C5orf24Q7Z6I8 188 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 FAM219AQ8IW50 185 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 OR1S2Q8NGQ3 325 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 OR10J5Q8NHC4 309 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 ABHD14BQ96IU4 210 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 KIRREL1Q96J84 757 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 USB1Q9BQ65 265 aaKnown RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 BCL2L14Q9BZR8 327 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 TAF9BQ9HBM6 251 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 PROCRQ9UNN8 238 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 UBE2J1Q9Y385 318 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 OR2W1Q9Y3N9 320 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
MKS1-203ENST00000393120 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.12□□□□□ -0.47
MKS1-203ENST00000393120 CLEC18AA5D8T8 446 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 ZSCAN5BA6NJL1 495 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 C1QTNF9BB2RNN3 333 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 CDIPTO14735 213 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 SCO1O75880 301 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 OR2H2O95918 312 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 HOXD4P09016 255 aaPredicted RBP12.12□□□□□ -0.47
MKS1-203ENST00000393120 GLI4P10075 376 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 RCC1P18754 421 aaPredicted RBP12.12□□□□□ -0.47
MKS1-203ENST00000393120 MPV17P39210 176 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 TMEM33P57088 247 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 FAM209AQ5JX71 171 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 SELENOHQ8IZQ5 122 aaKnown RBP12.12□□□□□ -0.47
MKS1-203ENST00000393120 ZNF610Q8N9Z0 462 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 CLEC18CQ8NCF0 446 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 OR52M1Q8NGK5 317 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 SPIN2AQ99865 258 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 SPIN2BQ9BPZ2 258 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 LPAR3Q9UBY5 353 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 POMT1Q9Y6A1 747 aa12.12□□□□□ -0.47
MKS1-203ENST00000393120 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 GPR137BO60478 399 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 SCGB1D2O95969 90 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 S100GP29377 79 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 IGFBP7Q16270 282 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
MKS1-203ENST00000393120 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
MKS1-203ENST00000393120 ZNF695Q8IW36 515 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 UBAC2Q8NBM4 344 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 GALNT11Q8NCW6 608 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 SMIM8Q96KF7 97 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 OR2S2Q9NQN1 319 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 MBNL3Q9NUK0 354 aaKnown RBP12.11□□□□□ -0.47
MKS1-203ENST00000393120 FBXL17Q9UF56 701 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 WIPI2Q9Y4P8 454 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 H0Y980 276 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.11□□□□□ -0.47
MKS1-203ENST00000393120 PGLYRP1O75594 196 aaPredicted RBP12.11□□□□□ -0.47
MKS1-203ENST00000393120 AGFG2O95081 481 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 NXPH2O95156 264 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 CECR9P0C854 216 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 SPINK2P20155 84 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 LMO1P25800 156 aa12.11□□□□□ -0.47
MKS1-203ENST00000393120 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms