RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ELL3Q9HB65 397 aaPredicted RBP7.71□□□□□ -1.17
GPNMB-202ENST00000381990 RCL1Q9Y2P8 373 aaKnown RBP7.71□□□□□ -1.17
GPNMB-202ENST00000381990 ZNF716A6NP11 495 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 CDRT15L2A8MXV6 281 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 ZNF732B4DXR9 585 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 ATP6V0CP27449 155 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 DDTP30046 118 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 ERVFRD-1P60508 538 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 TLE4Q04727 773 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 BAXQ07812 192 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 RSU1Q15404 277 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 SP6Q3SY56 376 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 KHDC3LQ587J8 217 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 SP5Q6BEB4 398 aaPredicted RBP7.71□□□□□ -1.18
GPNMB-202ENST00000381990 C20orf196Q8IYI0 205 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 FAM185AQ8N0U4 392 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 OR52M1Q8NGK5 317 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 OR10D3Q8NH80 312 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 SPSB1Q96BD6 273 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 PLEKHF2Q9H8W4 249 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 WSB1Q9Y6I7 421 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 CYB5BO43169 146 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 SCAF4O95104 1147 aaKnown RBP7.71□□□□□ -1.18
GPNMB-202ENST00000381990 CXCL1P09341 107 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 TCF15Q12870 199 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 ABLIM2Q6H8Q1 611 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 C1orf87Q8N0U7 546 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 GJC3Q8NFK1 279 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 MOB3AQ96BX8 217 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 CYYR1Q96J86 154 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 ULBP2Q9BZM5 246 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 METTL9Q9H1A3 318 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 LIME1Q9H400 295 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 PLA2G3Q9NZ20 509 aa7.71□□□□□ -1.18
GPNMB-202ENST00000381990 SLC31A2O15432 143 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 CEACAM1P13688 526 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 MMP9P14780 707 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 PAX1P15863 534 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 CLDN15P56746 228 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 TAS2R60P59551 318 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 ICAM4Q14773 271 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 NABP1Q96AH0 204 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 LYZL4Q96KX0 146 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 RBM24Q9BX46 236 aaKnown RBP7.7□□□□□ -1.18
GPNMB-202ENST00000381990 HES7Q9BYE0 225 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 LYRM2Q9NU23 88 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-202ENST00000381990 TRAV1-1A0A0B4J248 108 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 ZNF727A8MUV8 499 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 SOD3P08294 240 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 RAB4BP61018 213 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 HLA-DRB3P79483 266 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 MRPS34P82930 218 aaKnown RBP7.7□□□□□ -1.18
GPNMB-202ENST00000381990 ENDOGQ14249 297 aaKnown RBP7.7□□□□□ -1.18
GPNMB-202ENST00000381990 OR8B8Q15620 311 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 SPNS3Q6ZMD2 512 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 CYB561D1Q8N8Q1 229 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 ZFP62Q8NB50 900 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-202ENST00000381990 NPRL2Q8WTW4 380 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 RCC1LQ96I51 464 aaKnown RBP7.7□□□□□ -1.18
GPNMB-202ENST00000381990 GPR61Q9BZJ8 451 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 PIGLQ9Y2B2 252 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 KLF13Q9Y2Y9 288 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-202ENST00000381990 LIPGQ9Y5X9 500 aa7.7□□□□□ -1.18
GPNMB-202ENST00000381990 A0A1B0GV50 99 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 DUXBA0A1W2PPF3 345 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 H0YL77 283 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 PHF1O43189 567 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-202ENST00000381990 CYTIPO60759 359 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 LY86O95711 162 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 TRGC2P03986 189 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 SP1P08047 785 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 FAHP16930 419 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 OTX1P32242 354 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-202ENST00000381990 NKX2-1P43699 371 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-202ENST00000381990 RND2P52198 227 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 RRADP55042 308 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 HIST1H3AP68431 136 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 CCL20P78556 96 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 OR2T2Q6IF00 324 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 AAED1Q7RTV5 226 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 SLC35G3Q8N808 338 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 MDS2Q8NDY4 140 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 OR5L1Q8NGL2 311 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 CLDND2Q8NHS1 167 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 FAM210BQ96KR6 192 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 HDHD3Q9BSH5 251 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-202ENST00000381990 TTTY12Q9BZ98 90 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 ZNF286AQ9HBT8 521 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 ASCL3Q9NQ33 180 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 PITPNC1Q9UKF7 332 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 CNOT1A5YKK6 2376 aaKnown RBP7.69□□□□□ -1.18
GPNMB-202ENST00000381990 A0A087X0M5 115 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 TGIF2-C20orf24A0A0A6YYL0 155 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 A0A1B0GX30 115 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 MKRN2OSH3BPM6 223 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 CEACAM6P40199 344 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 MTCP1P56278 107 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 SOX8P57073 446 aa7.69□□□□□ -1.18
GPNMB-202ENST00000381990 PLGLB1Q02325 96 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms