RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 OR4F4Q96R69 305 aa5.04□□□□□ -1.6
RFC1-202ENST00000381897 NICN1Q9BSH3 213 aa5.04□□□□□ -1.6
RFC1-202ENST00000381897 DDA1Q9BW61 102 aa5.04□□□□□ -1.6
RFC1-202ENST00000381897 OR10A2Q9H208 303 aa5.04□□□□□ -1.6
RFC1-202ENST00000381897 U3KQE9 123 aa5.04□□□□□ -1.6
RFC1-202ENST00000381897 BRCA1P38398 1863 aaKnown RBP5.04□□□□□ -1.6
RFC1-202ENST00000381897 XIRP2A4UGR9 3374 aa5.04□□□□□ -1.6
RFC1-202ENST00000381897 LOC107986453A0A1B0GWG9 222 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 A0A1W2PR80 420 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 LRP5LA4QPB2 252 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MS4A18H0YCH9 400 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 J3QL48 77 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 OR8U8P0C7N1 319 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 SCGB1A1P11684 91 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MPZP25189 248 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ZNF93P35789 620 aaPredicted RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 LPAR6P43657 344 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 CSNK1A1P48729 337 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 HLA-DRB3P79483 266 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 LY6G6FQ5SQ64 297 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 DPPA3Q6W0C5 159 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ZNF695Q8IW36 515 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MMD2Q8IY49 270 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 OR4S1Q8NGB4 309 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 OR1E3Q8WZA6 343 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 JMJD8Q96S16 334 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ATG101Q9BSB4 218 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 LYRM2Q9NU23 88 aaPredicted RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 MRM2Q9UI43 246 aaKnown RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 AMDHD2Q9Y303 409 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 PCM1Q15154 2024 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 A0A1B0GTH9 108 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 PIN1P1O15428 100 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 HLA-HP01893 362 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 CD5P06127 495 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 SELLP14151 372 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 HMGA1P17096 107 aaKnown RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 BTG2P78543 158 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ELAVL3Q14576 367 aaKnown RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 BIVMQ86UB2 503 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 LRRC18Q8N456 261 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 AMER3Q8N944 861 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 OR51F2Q8NH61 342 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 OTOSQ8NHW6 89 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 TMEM234Q8WY98 164 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 DDIT4LQ96D03 193 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 GALNT14Q96FL9 552 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MRAP2Q96G30 205 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 NDUFAF3Q9BU61 184 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 CHST5Q9GZS9 411 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 LIME1Q9H400 295 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MBNL3Q9NUK0 354 aaKnown RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 ELOVL5Q9NYP7 299 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 FRRS1LQ9P0K9 344 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 PISDQ9UG56 409 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 WSB1Q9Y6I7 421 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MGAMO43451 1857 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MYO7AQ13402 2215 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 TGIF2-C20orf24A0A0A6YYL0 155 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 A0A1W2PQF6 199 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MBD3L5A6NJ08 208 aaPredicted RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 H3BQ15 152 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 SNCGO76070 127 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ZNF728P0DKX0 622 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 DAOP14920 347 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ALOX5APP20292 161 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 P2RY1P47900 373 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ZNF134P52741 427 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 TMEM33P57088 247 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 KIR2DS3Q14952 304 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 PRTGQ2VWP7 1150 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 WDR38Q5JTN6 314 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 SLC35E3Q7Z769 313 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 C17orf78Q8N4C9 275 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 CMBLQ96DG6 245 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 PRSS27Q9BQR3 290 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 WFDC6Q9BQY6 131 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 G6PC2Q9NQR9 355 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 HDGFL3Q9Y3E1 203 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 NSG1A0A0A6YYJ2 146 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 A0A1B0GUS0 222 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 RNF223E7ERA6 249 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 H7BYZ3 331 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MOSPD3O75425 235 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 FABP2P12104 132 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 CEACAM1P13688 526 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 ADCYAP1P18509 176 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 NPY1RP25929 384 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 RPS4XP62701 263 aaKnown RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 FUT5Q11128 374 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 METRNLQ641Q3 311 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 BTNL8Q6UX41 500 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 SSX8Q7RTT4 187 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 SP7Q8TDD2 431 aaPredicted RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 NKX3-1Q99801 234 aaPredicted RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 ZNF2Q9BSG1 426 aaPredicted RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 PARP12Q9H0J9 701 aaKnown RBP5.03□□□□□ -1.6
RFC1-202ENST00000381897 NECAP2Q9NVZ3 263 aa5.03□□□□□ -1.6
RFC1-202ENST00000381897 TRAV36DV7A0A075B6V5 113 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms