RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 ARFGEF2Q9Y6D5 1785 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 B4E171 279 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 BCL2L11O43521 198 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 CST2P09228 141 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 SSTR5P35346 364 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 COL10A1Q03692 680 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 C11orf87Q6NUJ2 197 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 ZNF665Q9H7R5 613 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 IGSF23A1L1A6 192 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 APCSP02743 223 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 LTBRP36941 435 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 ELOBQ15370 118 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 DEFB121Q5J5C9 76 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 RHBDD2Q6NTF9 364 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 FUNDC1Q8IVP5 155 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 NPFFR1Q9GZQ6 430 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 SPTY2D1-AS1A0A0U1RR47 76 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 HOXB3P14651 431 aaPredicted RBP10.96□□□□□ -0.66
CHD3-203ENST00000380358 PIGYQ3MUY2 71 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 AMER3Q8N944 861 aa10.96□□□□□ -0.66
CHD3-203ENST00000380358 APC2O95996 2303 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 CHST1O43916 411 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 DHRS3O75911 302 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 RNF7Q9UBF6 113 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 K7ERU9 68 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 EIF3GO75821 320 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHD3-203ENST00000380358 CA2P00918 260 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 DLX6P56179 175 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 DIRC2Q96SL1 478 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 NPAP1Q9NZP6 1156 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 COL14A1Q05707 1796 aaKnown RBP10.95□□□□□ -0.66
CHD3-203ENST00000380358 A0A1B0GUH1 482 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 TNFSF14O43557 240 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 SLC6A1P30531 599 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 PMELP40967 661 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 B4GALNT1Q00973 533 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 PPP1R1AQ13522 171 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 WDR73Q6P4I2 378 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 MRGPRFQ96AM1 343 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 CNRIP1Q96F85 164 aaPredicted RBP10.95□□□□□ -0.66
CHD3-203ENST00000380358 TRIP11Q15643 1979 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 HOXC8P31273 242 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 NHLRC1Q6VVB1 395 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 CALHM1Q8IU99 346 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 SYT8Q8NBV8 401 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 NTMQ9P121 344 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 FUT9Q9Y231 359 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 VSIG10L2P0DP72 767 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 FCARP24071 287 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 DND1Q8IYX4 353 aaKnown RBP10.95□□□□□ -0.66
CHD3-203ENST00000380358 CADM4Q8NFZ8 388 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 PHLDA3Q9Y5J5 127 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 BPIFA4PQ86YQ2 179 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 OTOSQ8NHW6 89 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 PHYHIPQ92561 330 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 LEAP2Q969E1 77 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 GSX2Q9BZM3 304 aa10.95□□□□□ -0.66
CHD3-203ENST00000380358 C16orf97H3BN30 126 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 PRRX2Q99811 253 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 ZNF735P0CB33 412 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 MFAP4P55083 255 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 TMEM78Q5T7P6 136 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 UNQ5815/PRO19632Q6UWF5 114 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 YBX2Q9Y2T7 364 aaKnown RBP10.94□□□□□ -0.66
CHD3-203ENST00000380358 OR51B2Q9Y5P1 312 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 DIRC3C9JPN6 131 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 GP2P55259 537 aaKnown RBP10.94□□□□□ -0.66
CHD3-203ENST00000380358 CADM3Q8N126 398 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 TMEM229BQ8NBD8 167 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 CD74P04233 296 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 FCGR2BP31994 310 aaPredicted RBP10.94□□□□□ -0.66
CHD3-203ENST00000380358 FAM53BQ14153 422 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 CTF1Q16619 201 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 DLEU7Q6UYE1 221 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 METTL1Q9UBP6 276 aaKnown RBP10.94□□□□□ -0.66
CHD3-203ENST00000380358 NPIPB6E9PJ23 425 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 FUCA1P04066 466 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 C2orf83Q53S99 150 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 SLC25A37Q9NYZ2 338 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 HIGD1AQ9Y241 93 aa10.94□□□□□ -0.66
CHD3-203ENST00000380358 SNURFLB1AK76 121 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 CLDN14O95500 239 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 AANATQ16613 207 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 TMEM255AQ5JRV8 349 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 ZNF324BQ6AW86 544 aaPredicted RBP10.93□□□□□ -0.66
CHD3-203ENST00000380358 TDRD6O60522 2096 aaKnown RBP10.93□□□□□ -0.66
CHD3-203ENST00000380358 HIST1H1DP16402 221 aaKnown RBP10.93□□□□□ -0.66
CHD3-203ENST00000380358 PRB3Q04118 309 aaPredicted RBP10.93□□□□□ -0.66
CHD3-203ENST00000380358 ASAH1Q13510 395 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 UNQ9370/PRO34162Q6UXP9 181 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 UCN2Q96RP3 112 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 GPA33Q99795 319 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 PIMREGQ9BSJ6 248 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 TMEM191AQ9H0A3 160 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 NPFFO15130 113 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 C1QBP02746 253 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 FCGR3AP08637 254 aa10.93□□□□□ -0.66
CHD3-203ENST00000380358 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms