RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ZFAND6Q6FIF0 208 aa13.92□□□□□ -0.18
PDLIM4-202ENST00000379018 ZNF565Q8N9K5 539 aa13.92□□□□□ -0.18
PDLIM4-202ENST00000379018 OR51A4Q8NGJ6 313 aa13.92□□□□□ -0.18
PDLIM4-202ENST00000379018 OR2G2Q8NGZ5 317 aa13.92□□□□□ -0.18
PDLIM4-202ENST00000379018 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
PDLIM4-202ENST00000379018 OSBPL10Q9BXB5 764 aa13.92□□□□□ -0.18
PDLIM4-202ENST00000379018 DNAH7Q8WXX0 4024 aa13.92□□□□□ -0.18
PDLIM4-202ENST00000379018 IGHV1-3A0A0C4DH29 117 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 CCRL2O00421 344 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 HTR1FP30939 366 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 CDX1P47902 265 aaPredicted RBP13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 EFNB1P98172 346 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 ZNF85Q03923 595 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 FOXE3Q13461 319 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 OR11H1Q8NG94 326 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 OR51T1Q8NGJ9 327 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 UBALD1Q8TB05 177 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 GON7Q9BXV9 100 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 ABCG5Q9H222 651 aa13.91□□□□□ -0.18
PDLIM4-202ENST00000379018 CGB3P0DN86 165 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 CGB7P0DN87 165 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 T-ENOLP0DO92 83 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 VDAC1P21796 283 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 TGIF2LXQ8IUE1 241 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 Q8N9W7 124 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 PLPPR1Q8TBJ4 325 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 C4orf3Q8WVX3 66 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 NRBF2Q96F24 287 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 OR5B12Q96R08 314 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 RASL11BQ9BPW5 248 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 BARHL1Q9BZE3 327 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 LIN7CQ9NUP9 197 aaKnown RBP13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 FRRS1LQ9P0K9 344 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 MYRFQ9Y2G1 1151 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 SACSQ9NZJ4 4579 aa13.9□□□□□ -0.18
PDLIM4-202ENST00000379018 TRAV24A0A0B4J272 114 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 MPZL2O60487 215 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 GAPDHP04406 335 aaKnown RBP13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 ELANEP08246 267 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 HTR1AP08908 422 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 HOXB6P17509 224 aaKnown RBP13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 NANOS3P60323 173 aaKnown RBP13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 DOC2BQ14184 412 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 OR2T10Q8NGZ9 312 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 RNF166Q96A37 237 aaPredicted RBP13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 SLC7A6OSQ96CW6 309 aaPredicted RBP13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 MBOAT4Q96T53 435 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 HSPB9Q9BQS6 159 aa13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 SIRT4Q9Y6E7 314 aaPredicted RBP13.89□□□□□ -0.19
PDLIM4-202ENST00000379018 EPPK1P58107 5090 aaKnown RBP13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 LCE6AA0A183 80 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 ISL1P61371 349 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 ZNF816Q0VGE8 651 aaPredicted RBP13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 RSBN1Q5VWQ0 802 aaPredicted RBP13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 FAM53AQ6NSI3 398 aaPredicted RBP13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 SAXO1Q8IYX7 474 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 OR10K1Q8NGX5 313 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 CNIH3Q8TBE1 160 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 RNFT2Q96EX2 444 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 FAM192AQ9GZU8 254 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 ZCCHC4Q9H5U6 513 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 ISYNA1Q9NPH2 558 aa13.88□□□□□ -0.19
PDLIM4-202ENST00000379018 BIRC6Q9NR09 4857 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 IGHV3-43A0A0B4J1X8 118 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 TCRBV3S1A0A5B6 114 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 G3V2T6 193 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 IGHV3-43DP0DP04 118 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 MTNR1BP49286 362 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 ZP1P60852 638 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 PIGYQ3MUY2 71 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 FAM27D1Q5T7N8 215 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 SATL1Q86VE3 508 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 IZUMO1Q8IYV9 350 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 Q8N6K4 173 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 KCTD7Q96MP8 289 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 S1PR3Q99500 378 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 RIBC2Q9H4K1 309 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 GNB4Q9HAV0 340 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 RHOFQ9HBH0 211 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 FAM118AQ9NWS6 357 aa13.87□□□□□ -0.19
PDLIM4-202ENST00000379018 ZNF736B4DX44 427 aaPredicted RBP13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 NPIPB11E5RHQ5 1161 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 MT-ND2P03891 347 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 ISG15P05161 165 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 OR8U8P0C7N1 319 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 FRMD6-AS1P0C7T7 363 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 SLC2A2P11168 524 aaPredicted RBP13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 DBTP11182 482 aaKnown RBP13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 MYF6P23409 242 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 POLR2IP36954 125 aaKnown RBP13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 FHL3Q13643 280 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 EBI3Q14213 229 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 KISS1Q15726 138 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 ZNF691Q5VV52 312 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 OR1N2Q8NGR9 330 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 EME1Q96AY2 570 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 GPER1Q99527 375 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 ZMAT4Q9H898 229 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 ZNF581Q9P0T4 197 aa13.86□□□□□ -0.19
PDLIM4-202ENST00000379018 DAPL1A0PJW8 107 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms