RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FABP9Q0Z7S8 132 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 GUCA2BQ16661 112 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 CLEC18BQ6UXF7 455 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 MSI2Q96DH6 328 aaKnown RBP12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 NAA60Q9H7X0 242 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 CST7O76096 145 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 ASCL1P50553 236 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 UBE2KP61086 200 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 RAB32Q13637 225 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 CLEC9AQ6UXN8 241 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 HOGA1Q86XE5 327 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 OR2G3Q8NGZ4 309 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 ASB13Q8WXK3 278 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 LINC00470Q9BZP3 86 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 SLC25A32Q9H2D1 315 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 SPG11Q96JI7 2443 aa12.27□□□□□ -0.44
SHROOM1-203ENST00000378679 TRBV23-1A0A0A0MS06 115 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 C7orf66A4D0T2 115 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 ABCD4O14678 606 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 HAND1O96004 215 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 PPYP01298 95 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 HOXD4P09016 255 aaPredicted RBP12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 CPN1P15169 458 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 DTYMKP23919 212 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 PTGDSP41222 190 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 MEOX2P50222 304 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 LHX2P50458 406 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 RAB11AP62491 216 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 TLE1Q04724 770 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 FOXO1Q12778 655 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM255AQ5JRV8 349 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 HIST2H3PS2Q5TEC6 136 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 HIST2H3AQ71DI3 136 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM123Q8N131 208 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 ZNF485Q8NCK3 441 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 PRDM14Q9GZV8 571 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 CREBBPQ92793 2442 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 SPP1P10451 314 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 MDH2P40926 338 aaKnown RBP12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 SSX2Q16385 188 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 LRRC10Q5BKY1 277 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 GGNBP1Q5YKI7 109 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 FRZBQ92765 325 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 OSGIN2Q9Y236 505 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 TMED3Q9Y3Q3 217 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 USF3Q68DE3 2245 aa12.27□□□□□ -0.45
SHROOM1-203ENST00000378679 TRDCB7Z8K6 153 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 TAAR5O14804 337 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 CTSDP07339 412 aaPredicted RBP12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 TMPRSS3P57727 454 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 OR5M8Q8NGP6 311 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM45BQ96B21 275 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 SLC39A9Q9NUM3 307 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 MRPS18CQ9Y3D5 142 aaKnown RBP12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 DHRS7CA6NNS2 312 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 SYNGR1O43759 233 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 CLDN18P56856 261 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 SURF2Q15527 256 aaPredicted RBP12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 KCNMB1Q16558 191 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 HFEQ30201 348 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 GLRX5Q86SX6 157 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 HEATR1Q9H583 2144 aaKnown RBP12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 FER1L5A0AVI2 2057 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 C3orf85A0A1B0GTC6 90 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 ADAM20O43506 726 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 ARG1P05089 322 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 COX5BP10606 129 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 MPPED2Q15777 294 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 FAHD2BQ6P2I3 314 aaPredicted RBP12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 VWA1Q6PCB0 445 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 Q6ZT83 130 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 FAM24BQ8N5W8 94 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 FAHD2AQ96GK7 314 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 TUBG2Q9NRH3 451 aa12.26□□□□□ -0.45
SHROOM1-203ENST00000378679 TRIOO75962 3097 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 ZNF705FA8MVS1 300 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 ZNF705DP0CH99 300 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 ZNF705BP0CI00 300 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 KITLGP21583 273 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 CTSSP25774 331 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 CCL8P80075 99 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 ZNF826PQ6ZT77 177 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 LYG1Q8N1E2 194 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 SAP30LQ9HAJ7 183 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 RHOFQ9HBH0 211 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 ZMAT5Q9UDW3 170 aaKnown RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 TIMM8BQ9Y5J9 83 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 A0A1B0GTI1 187 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 TMPRSS2O15393 492 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 SFT2D1Q8WV19 159 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 ZNF716A6NP11 495 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 CRYBA1P05813 215 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 GNG10P50151 68 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms