RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 JTBO76095 146 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 RPL27P61353 136 aaKnown RBP13.48□□□□□ -0.25
FXN-201ENST00000377270 IL24Q13007 206 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 TMEM128Q5BJH2 165 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 C1orf140Q5VVS0 124 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 ASPHD2Q6ICH7 369 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 MDGA2Q7Z553 956 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 MARCH1Q8TCQ1 289 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 RHBDD1Q8TEB9 315 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 B9D1Q9UPM9 204 aa13.48□□□□□ -0.25
FXN-201ENST00000377270 RNF212BA8MTL3 300 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 PROB1E7EW31 1015 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 SLC16A7O60669 478 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 GAPDHP04406 335 aaKnown RBP13.47□□□□□ -0.25
FXN-201ENST00000377270 PPIAL4GP0DN37 164 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 CXCL12P48061 93 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 WDR38Q5JTN6 314 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 C11orf40Q8WZ69 217 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 G6PC2Q9NQR9 355 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 ELOVL5Q9NYP7 299 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 FUT9Q9Y231 359 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 PRSS37A4D1T9 235 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 YPEL1O60688 119 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 NPIPB7O75200 414 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
FXN-201ENST00000377270 SHBQ15464 509 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 SLC38A9Q8NBW4 561 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 OR52L2PQ8NGH6 319 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 OR10S1Q8NGN2 331 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 OTOSQ8NHW6 89 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 YPEL2Q96QA6 119 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 SMDT1Q9H4I9 107 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 ELL3Q9HB65 397 aaPredicted RBP13.47□□□□□ -0.25
FXN-201ENST00000377270 LYRM2Q9NU23 88 aaPredicted RBP13.47□□□□□ -0.25
FXN-201ENST00000377270 FBXL17Q9UF56 701 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 TRIOBPQ9H2D6 2365 aa13.47□□□□□ -0.25
FXN-201ENST00000377270 RBFOX3A6NFN3 312 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 ANOS1P23352 680 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 RAB9AP51151 201 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 TMEM225Q6GV28 225 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 HOGA1Q86XE5 327 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 OR10C1Q96KK4 312 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 C2orf50Q96LR7 162 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 SLC45A2Q9UMX9 530 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 OR5B21A6NL26 309 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 G3V3Y1 287 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 K7ESF4 209 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 DXOO77932 396 aaKnown RBP13.46□□□□□ -0.25
FXN-201ENST00000377270 SFT2D2O95562 160 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 HNRNPA3P51991 378 aaKnown RBP13.46□□□□□ -0.25
FXN-201ENST00000377270 FBXW4P57775 412 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 MEP1BQ16820 701 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 MPV17LQ2QL34 196 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 CYB561D1Q8N8Q1 229 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 ZNF519Q8TB69 540 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 TXNIPQ9H3M7 391 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 ELOVL3Q9HB03 270 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 CKLFQ9UBR5 152 aa13.46□□□□□ -0.25
FXN-201ENST00000377270 CGGBP1Q9UFW8 167 aaPredicted RBP13.46□□□□□ -0.25
FXN-201ENST00000377270 COL5A1P20908 1838 aaPredicted RBP13.46□□□□□ -0.26
FXN-201ENST00000377270 PLPP3O14495 311 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 CLEC18BQ6UXF7 455 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 Q6ZN92 141 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 NIT1Q86X76 327 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 ZNF709Q8N972 641 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 POC1AQ8NBT0 407 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 LFNGQ8NES3 379 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 TMEM170AQ8WVE7 144 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 TRAV34A0A0B4J273 112 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 HSPB2A8KAH6 182 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 OR7C2O60412 319 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 TIAF1O95411 115 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 SYNGR4O95473 234 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 HLA-DRB3P79483 266 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 HSPB2Q16082 182 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 OPN5Q6U736 354 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 ANKRD37Q7Z713 158 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 ZNF679Q8IYX0 411 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 C17orf78Q8N4C9 275 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 TMEM9BQ9NQ34 198 aa13.45□□□□□ -0.26
FXN-201ENST00000377270 ASCC3Q8N3C0 2202 aaKnown RBP13.45□□□□□ -0.26
FXN-201ENST00000377270 PPIAL4EA0A075B759 164 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 PPIAL4CA0A0B4J2A2 164 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 A0A1W2PRS3 328 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 WIPF3A6NGB9 483 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 B4DEV8 164 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 PPIAL4DF5H284 164 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
FXN-201ENST00000377270 RAMP3O60896 148 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 PPIAL4FP0DN26 164 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 CTLA4P16410 223 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 IL11P20809 199 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 PAX2Q02962 417 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 IL15RAQ13261 267 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 WDR25Q64LD2 544 aaPredicted RBP13.44□□□□□ -0.26
FXN-201ENST00000377270 IGF2-ASQ6U949 168 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 OR1N2Q8NGR9 330 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 NKD1Q969G9 470 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms