RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 WDR5BQ86VZ2 330 aa11.33□□□□□ -0.6
ACTN1-202ENST00000376839 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
ACTN1-202ENST00000376839 MTCH1Q9NZJ7 389 aa11.33□□□□□ -0.6
ACTN1-202ENST00000376839 KIAA1456Q9P272 454 aa11.33□□□□□ -0.6
ACTN1-202ENST00000376839 ZNF732B4DXR9 585 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 TUSC2O75896 110 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 UCP1P25874 307 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 OTX2P32243 289 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 EIF2S3P41091 472 aaKnown RBP11.32□□□□□ -0.6
ACTN1-202ENST00000376839 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
ACTN1-202ENST00000376839 ACER2Q5QJU3 275 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 IL22RA1Q8N6P7 574 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 NEK7Q8TDX7 302 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 CPNE4Q96A23 557 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-202ENST00000376839 TCEAL7Q9BRU2 100 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 A0A0G2JRQ6 117 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 H3BP45 60 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 HSPA12AO43301 675 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 CYTIPO60759 359 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 VDAC1P21796 283 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 FOXG1P55316 489 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-202ENST00000376839 PAX9P55771 341 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 FGF12P61328 243 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 TCTEX1D2Q8WW35 142 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 PRDM6Q9NQX0 595 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 TAAR3PQ9P1P4 343 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 FRYQ5TBA9 3013 aa11.32□□□□□ -0.6
ACTN1-202ENST00000376839 CLEC18AA5D8T8 446 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 SCAF4O95104 1147 aaKnown RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 IFNA17P01571 189 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 HLA-HP01893 362 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 GDF1P27539 372 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 C1QL4Q86Z23 238 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 CLEC18CQ8NCF0 446 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 OR8G5Q8NG78 346 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 REPIN1Q9BWE0 567 aaKnown RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 RNF115Q9Y4L5 304 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 ZNF503-AS2A6NEH8 195 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 PATE3B3GLJ2 98 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 NTN3O00634 580 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 SYNGR1O43759 233 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 YIF1AO95070 293 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 CXCL1P09341 107 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 UBE2KP61086 200 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 DLK1P80370 383 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 ARF1P84077 181 aaKnown RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 IZUMO4Q1ZYL8 232 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 P4HA3Q7Z4N8 544 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 ZNF488Q96MN9 340 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 OR51M1Q9H341 326 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 URGCP-MRPS24S4R325 110 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 WDFY4Q6ZS81 3184 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 C5orf49A4QMS7 147 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A10PA6NDY2 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A18PA6NE21 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A16PA6NEW6 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A20PA6NIJ5 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A8PA6NJQ4 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A7PA6NKC0 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A22PA8MWA6 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A12PA8MX19 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A5PA8MXJ8 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A23PA8MXZ1 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 SLC34A2O95436 690 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A15PP0C7V4 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A13PP0C7W8 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A14PP0C7W9 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FAM90A24PP0C7X0 464 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 ZFP36L1Q07352 338 aaKnown RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 FOXO1Q12778 655 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 KIAA0141Q14154 515 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 ZNF429Q86V71 674 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 ZNF295-AS1Q8N0V1 137 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 Q8WTZ3 238 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 EDARADDQ8WWZ3 215 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 ABHD14BQ96IU4 210 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 PRRG4Q9BZD6 226 aa11.31□□□□□ -0.6
ACTN1-202ENST00000376839 NOSIPQ9Y314 301 aaKnown RBP11.31□□□□□ -0.6
ACTN1-202ENST00000376839 BTBD17A6NE02 478 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 IFITM10A6NMD0 228 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 WRBO00258 174 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-202ENST00000376839 FAM209BQ5JX69 171 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 PCSK4Q6UW60 755 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 CLDND2Q8NHS1 167 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 GNPNAT1Q96EK6 184 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-202ENST00000376839 CALHM2Q9HA72 323 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 SIT1Q9Y3P8 196 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 ATP23Q9Y6H3 246 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 WSB1Q9Y6I7 421 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 GFRA1P56159 465 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms