RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 C6orf15Q6UXA7 325 aaPredicted RBP12.47□□□□□ -0.41
MSH5-201ENST00000375703 CT55Q8WUE5 264 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 ABHD14BQ96IU4 210 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 CALHM2Q9HA72 323 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 BOKQ9UMX3 212 aaPredicted RBP12.47□□□□□ -0.41
MSH5-201ENST00000375703 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 IGKV3D-15A0A087WSY6 115 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 hCG_1809904A0A1W2PP81 198 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 A0A1W2PR64 198 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 A0A1W2PRV1 198 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 CDRT15L2A8MXV6 281 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 CTXN2P0C2S0 81 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 UCP1P25874 307 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 DYNLT3P51808 116 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 MPV17LQ2QL34 196 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 FAM209BQ5JX69 171 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 ADAM5Q6NVV9 412 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 TIPARPQ7Z3E1 657 aaKnown RBP12.46□□□□□ -0.41
MSH5-201ENST00000375703 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 CMTM1Q8IZ96 169 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 IL22RA1Q8N6P7 574 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 TMEM217Q8N7C4 229 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 PSMF1Q92530 271 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 HIST1H2AAQ96QV6 131 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 IER2Q9BTL4 223 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 A0A1W2PPE2 198 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 A0A1W2PPE3 182 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 CLEC18AA5D8T8 446 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 UBE2CO00762 179 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 CHST1O43916 411 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 TUSC2O75896 110 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 NXPH3O95157 252 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 FOXG1P55316 489 aaPredicted RBP12.46□□□□□ -0.41
MSH5-201ENST00000375703 RAB1AP62820 205 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 S100A12P80511 92 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 UBALD2Q8IYN6 164 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 CLEC18CQ8NCF0 446 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 APOBEC3DQ96AK3 386 aaPredicted RBP12.46□□□□□ -0.41
MSH5-201ENST00000375703 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
MSH5-201ENST00000375703 TMEM265A0A087WTH1 108 aa12.46□□□□□ -0.42
MSH5-201ENST00000375703 IGKV1-6A0A0C4DH72 117 aa12.46□□□□□ -0.42
MSH5-201ENST00000375703 SLC33A1O00400 549 aaPredicted RBP12.46□□□□□ -0.42
MSH5-201ENST00000375703 TNFSF12O43508 249 aa12.46□□□□□ -0.42
MSH5-201ENST00000375703 SPSB3Q6PJ21 355 aa12.46□□□□□ -0.42
MSH5-201ENST00000375703 THOC3Q96J01 351 aaKnown RBP12.46□□□□□ -0.42
MSH5-201ENST00000375703 SIGLEC12Q96PQ1 595 aa12.46□□□□□ -0.42
MSH5-201ENST00000375703 WRBO00258 174 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 TMEM50AO95807 157 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 NGFP01138 241 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 ODF3L1Q8IXM7 274 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 OR5A2Q8NGI9 324 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 PRDM6Q9NQX0 595 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 SYNGR1O43759 233 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 PGLYRP1O75594 196 aaPredicted RBP12.45□□□□□ -0.42
MSH5-201ENST00000375703 S100A8P05109 93 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
MSH5-201ENST00000375703 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
MSH5-201ENST00000375703 MMP9P14780 707 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 LHX2P50458 406 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 FABP9Q0Z7S8 132 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
MSH5-201ENST00000375703 OR5D13Q8NGL4 314 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
MSH5-201ENST00000375703 GNPNAT1Q96EK6 184 aaPredicted RBP12.45□□□□□ -0.42
MSH5-201ENST00000375703 ZNF552Q9H707 407 aaPredicted RBP12.45□□□□□ -0.42
MSH5-201ENST00000375703 BTBD17A6NE02 478 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 ZNF503-AS2A6NEH8 195 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 HS3ST1O14792 307 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 SLC34A2O95436 690 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 CELA3AP09093 270 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 COX5BP10606 129 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 PEAR1Q5VY43 1037 aaPredicted RBP12.44□□□□□ -0.42
MSH5-201ENST00000375703 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 NANPQ8TBE9 248 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 FAM173AQ9BQD7 235 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 LOXL2Q9Y4K0 774 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 TNRC6BQ9UPQ9 1833 aaKnown RBP12.44□□□□□ -0.42
MSH5-201ENST00000375703 VPS13AQ96RL7 3174 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 OR2C1O95371 312 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 SYNGR4O95473 234 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 PDGFBP01127 241 aaPredicted RBP12.44□□□□□ -0.42
MSH5-201ENST00000375703 ZNF806P0C7X5 589 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 TDGF1P13385 188 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 OR2B8PP59922 312 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 BAXQ07812 192 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 ZNF154Q13106 437 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 C20orf204Q6ZNR8 217 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 OR8G5Q8NG78 346 aa12.44□□□□□ -0.42
MSH5-201ENST00000375703 RIMS4Q9H426 269 aaPredicted RBP12.44□□□□□ -0.42
MSH5-201ENST00000375703 H0Y980 276 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 EPHA1P21709 976 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 CEBPGP53567 150 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 HAGHQ16775 308 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 FIP1L1Q6UN15 594 aaKnown RBP12.43□□□□□ -0.42
MSH5-201ENST00000375703 PCSK4Q6UW60 755 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 IL22RA2Q969J5 263 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 ZNF488Q96MN9 340 aa12.43□□□□□ -0.42
MSH5-201ENST00000375703 UNKLQ9H9P5 680 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms