RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TRAV36DV7A0A075B6V5 113 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 TRAV38-1A0A0B4J264 116 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 C7orf66A4D0T2 115 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 RAMP2O60895 175 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 SOX14O95416 240 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 CA1P00915 261 aaPredicted RBP6.81□□□□□ -1.32
USP48-203ENST00000374732 PPIFP30405 207 aaKnown RBP6.81□□□□□ -1.32
USP48-203ENST00000374732 RBM11P57052 281 aaKnown RBP6.81□□□□□ -1.32
USP48-203ENST00000374732 FZD2Q14332 565 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 PDGFRLQ15198 375 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 PYDC2Q56P42 97 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 LYSMD4Q5XG99 296 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 TMEM183AQ8IXX5 376 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 ADAD2Q8NCV1 583 aaKnown RBP6.81□□□□□ -1.32
USP48-203ENST00000374732 OR1L8Q8NGR8 309 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 CDX2Q99626 313 aaPredicted RBP6.81□□□□□ -1.32
USP48-203ENST00000374732 TEX101Q9BY14 249 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 PDFQ9HBH1 243 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 HRASLS2Q9NWW9 162 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 MARCH5Q9NX47 278 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 SLC2A6Q9UGQ3 507 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 ANXA10Q9UJ72 324 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 INSIG2Q9Y5U4 225 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 A0A087WUU8 490 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 A0A1B0GTI1 187 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 MS4A18H0YCH9 400 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 EFNA2O43921 213 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 ZG16O60844 167 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 TRGC1P0CF51 173 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 SP9P0CG40 484 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 HKR1P10072 659 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 PVRP15151 417 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 TAF10Q12962 218 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 C1orf61Q13536 156 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 TECRLQ5HYJ1 363 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 ZADH2Q8N4Q0 377 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 OR2T33Q8NG76 320 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 OR8B12Q8NGG6 310 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 PELI2Q9HAT8 420 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 PATZ1Q9HBE1 687 aaKnown RBP6.81□□□□□ -1.32
USP48-203ENST00000374732 TAS2R8Q9NYW2 309 aa6.81□□□□□ -1.32
USP48-203ENST00000374732 ZNF816-ZNF321PA0A0X1KG74 233 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 GXYLT2A0PJZ3 443 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 TMEM8BA6NDV4 472 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 H0Y8X5 98 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 CCDC179H3BU77 68 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 DLX6P56179 175 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 HLA-DRB5Q30154 266 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 DCAF12Q5T6F0 453 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 SECTM1Q8WVN6 248 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 MBD3L1Q8WWY6 194 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 TMEM101Q96IK0 257 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 Q96MF0 132 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 LRRC3BQ96PB8 259 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 TMEM126AQ9H061 195 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 NAT8BQ9UHF3 227 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 LOC102723971A0A1B0GUV8 181 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 SH2D1BO14796 132 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 SPRY2O43597 315 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 COL8A1P27658 744 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 XGP55808 180 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 SLC35B1P78383 322 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 PSG7Q13046 419 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 RTP5Q14D33 572 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 TMEM52BQ4KMG9 183 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 C1orf195Q5TG92 126 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 C6orf120Q7Z4R8 191 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 PGBD5Q8N414 524 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 TMEM86BQ8N661 226 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 IQCF1Q8N6M8 205 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 OR13A1Q8NGR1 328 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 OR4F5Q8NH21 305 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 TMEM106AQ96A25 262 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 HSPB9Q9BQS6 159 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 RPS6KB2Q9UBS0 482 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 TMED7Q9Y3B3 224 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 ZNF780BQ9Y6R6 833 aa6.8□□□□□ -1.32
USP48-203ENST00000374732 LOC102725191A0A1B0GVB3 256 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 C1RP00736 705 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 GRPP07492 148 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 SP1P08047 785 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 TNFRSF1BP20333 461 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ACRV1P26436 265 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 NTSP30990 170 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 INPP1P49441 399 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 NUDT2P50583 147 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
USP48-203ENST00000374732 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
USP48-203ENST00000374732 EIF3IQ13347 325 aaKnown RBP6.79□□□□□ -1.32
USP48-203ENST00000374732 EDDM3AQ14507 147 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 IHHQ14623 411 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ALG10BQ5I7T1 473 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 FAM19A1Q7Z5A9 133 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 OR1F12Q8NHA8 337 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 FRZBQ92765 325 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 CLDN23Q96B33 292 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 FEVQ99581 238 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 CHIAQ9BZP6 476 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms