RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 BTNL8Q6UX41 500 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 COLCA1Q6ZS62 124 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 MDP1Q86V88 176 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 ZFP62Q8NB50 900 aaPredicted RBP14.59□□□□□ -0.07
RXRB-201ENST00000374680 SUMF2Q8NBJ7 301 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 OR10Z1Q8NGY1 313 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 SPSB4Q96A44 273 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 POM121L2Q96KW2 1035 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 RPS10P5Q9NQ39 176 aa14.59□□□□□ -0.07
RXRB-201ENST00000374680 ERRFI1Q9UJM3 462 aaPredicted RBP14.59□□□□□ -0.07
RXRB-201ENST00000374680 SLC22A20A6NK97 555 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 M0R036 132 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 LYZL6O75951 148 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 SP1P08047 785 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 NKX2-1P43699 371 aaPredicted RBP14.58□□□□□ -0.08
RXRB-201ENST00000374680 ARG2P78540 354 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 FAM53AQ6NSI3 398 aaPredicted RBP14.58□□□□□ -0.08
RXRB-201ENST00000374680 CCDC71LQ8N9Z2 235 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 Q9N2K0 584 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 ANKRD30BLA7E2S9 258 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 SNAPINO95295 136 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 PPP1CCP36873 323 aaKnown RBP14.58□□□□□ -0.08
RXRB-201ENST00000374680 CEBPDP49716 269 aaPredicted RBP14.58□□□□□ -0.08
RXRB-201ENST00000374680 RUNX1Q01196 453 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 IL34Q6ZMJ4 242 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 RNASE11Q8TAA1 199 aaKnown RBP14.58□□□□□ -0.08
RXRB-201ENST00000374680 CD300LFQ8TDQ1 290 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 PLEKHA2Q9HB19 425 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 FAM212BQ9NTI7 297 aaPredicted RBP14.58□□□□□ -0.08
RXRB-201ENST00000374680 ZNF391Q9UJN7 358 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 FZR1Q9UM11 496 aa14.58□□□□□ -0.08
RXRB-201ENST00000374680 BORCS7-ASMTA0A0B4J1R7 106 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 PROB1E7EW31 1015 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 CNOT4O95628 575 aaKnown RBP14.57□□□□□ -0.08
RXRB-201ENST00000374680 GRPP07492 148 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 F2RL1P55085 397 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 FGF12P61328 243 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 SAT2Q96F10 170 aaPredicted RBP14.57□□□□□ -0.08
RXRB-201ENST00000374680 OR1A1Q9P1Q5 309 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 OR14J1Q9UGF5 321 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 PPP1R3CQ9UQK1 317 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 ATXN7O15265 892 aaPredicted RBP14.57□□□□□ -0.08
RXRB-201ENST00000374680 SLC34A2O95436 690 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 EWSR1Q01844 656 aaKnown RBP eCLIP14.57□□□□□ -0.08
RXRB-201ENST00000374680 TMEM45BQ96B21 275 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 RSRP1Q9BUV0 290 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 SPACA1Q9HBV2 294 aa14.57□□□□□ -0.08
RXRB-201ENST00000374680 SMG1Q96Q15 3661 aaKnown RBP14.56□□□□□ -0.08
RXRB-201ENST00000374680 IGKV3D-15A0A087WSY6 115 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 IGSF23A1L1A6 192 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 GPR137BO60478 399 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 IL18BPO95998 194 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 IP6K3Q96PC2 410 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 SEC11CQ9BY50 192 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 HEATR1Q9H583 2144 aaKnown RBP14.56□□□□□ -0.08
RXRB-201ENST00000374680 USF3Q68DE3 2245 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 HSPA12AO43301 675 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 CRYBA1P05813 215 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 PLA2G5P39877 138 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 KCNJ3P48549 501 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 VAMP2P63027 116 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 OR2C3Q8N628 320 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 RXFP4Q8TDU9 374 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 RARRES2Q99969 163 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 ZPBPQ9BS86 351 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 OR2J1Q9GZK6 312 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 TMEM222Q9H0R3 208 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 IL36GQ9NZH8 169 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 PIEZO2Q9H5I5 2752 aa14.56□□□□□ -0.08
RXRB-201ENST00000374680 WRBO00258 174 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 TMEM50AO95807 157 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 CCL11P51671 97 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 CCL20P78556 96 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 PEA15Q15121 130 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 SELENOHQ8IZQ5 122 aaKnown RBP14.55□□□□□ -0.08
RXRB-201ENST00000374680 CLCC1Q96S66 551 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 FAM86C1Q9NVL1 165 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 ZNF175Q9Y473 711 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 TRDCB7Z8K6 153 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 CDIPTO14735 213 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 CHST1O43916 411 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 GUK1Q16774 197 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 UBAC2Q8NBM4 344 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 OR5C1Q8NGR4 320 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 C14orf79Q96F83 325 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 DDA1Q9BW61 102 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 SPRR3Q9UBC9 169 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 ARHGAP21Q5T5U3 1957 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 TRAV24A0A0B4J272 114 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 A0A0G2JRQ6 117 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 ZNF154Q13106 437 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 HFEQ30201 348 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 FAM58AQ8N1B3 248 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 CNEP1R1Q8N9A8 125 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 OR2G3Q8NGZ4 309 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 LILRB1Q8NHL6 650 aaPredicted RBP14.55□□□□□ -0.08
RXRB-201ENST00000374680 TMEM171Q8WVE6 324 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 RNF150Q9ULK6 438 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 KCNS2Q9ULS6 477 aa14.55□□□□□ -0.08
RXRB-201ENST00000374680 ZNF724A8MTY0 619 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms