RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 A0A1W2PR77 199 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 NPIPA2E9PIF3 369 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 NPIPA3F8WFD2 350 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 ZNHIT1O43257 154 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 OTX1P32242 354 aaPredicted RBP11.81□□□□□ -0.52
USP49-201ENST00000373006 OR5T1Q8NG75 326 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 ELOVL1Q9BW60 279 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 SLC25A31Q9H0C2 315 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 GOLT1BQ9Y3E0 138 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 PRRC2CQ9Y520 2896 aaKnown RBP11.81□□□□□ -0.52
USP49-201ENST00000373006 HSPB6O14558 160 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 CDS2O95674 445 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 NRASP01111 189 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 HNRNPKP61978 463 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP49-201ENST00000373006 MALLQ13021 153 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 IL22RA1Q8N6P7 574 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 SPSB1Q96BD6 273 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 HIST1H2BLQ99880 126 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 ULBP2Q9BZM5 246 aa11.81□□□□□ -0.52
USP49-201ENST00000373006 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
USP49-201ENST00000373006 IGLV3-19P01714 112 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 NPBWR2P48146 333 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 FGF8P55075 233 aaPredicted RBP11.8□□□□□ -0.52
USP49-201ENST00000373006 MLF1P58340 268 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 SLC25A24Q6NUK1 477 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 LCN15Q6UWW0 184 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 ZNF818PQ6ZRF7 136 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 MRPL41Q8IXM3 137 aaKnown RBP11.8□□□□□ -0.52
USP49-201ENST00000373006 SELENOHQ8IZQ5 122 aaKnown RBP11.8□□□□□ -0.52
USP49-201ENST00000373006 GAPTQ8N292 157 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 OR5L2Q8NGL0 311 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 MTCH2Q9Y6C9 303 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 TCN2P20062 427 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 CD33P20138 364 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 S100A7P31151 101 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
USP49-201ENST00000373006 TLE4Q04727 773 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 EIF3IQ13347 325 aaKnown RBP11.8□□□□□ -0.52
USP49-201ENST00000373006 IZUMO4Q1ZYL8 232 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 PIGCQ92535 297 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 EML6Q6ZMW3 1958 aa11.8□□□□□ -0.52
USP49-201ENST00000373006 BCAT2O15382 392 aaPredicted RBP11.79□□□□□ -0.52
USP49-201ENST00000373006 SLC35E3Q7Z769 313 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
USP49-201ENST00000373006 RASL10BQ96S79 203 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 C2orf88Q9BSF0 95 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 SNHG12Q9BXW3 62 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 AHCTF1Q8WYP5 2266 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 ZNF732B4DXR9 585 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 ZFAND5O76080 213 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 CD27P26842 260 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 UCP3P55916 312 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 CNN3Q15417 329 aaKnown RBP11.79□□□□□ -0.52
USP49-201ENST00000373006 RAB30Q15771 203 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 CALHM1Q8IU99 346 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 C1orf87Q8N0U7 546 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 CARFQ8N187 725 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 RSG1Q9BU20 258 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 VSIRQ9H7M9 311 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 ZNF665Q9H7R5 613 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 AKIRIN1Q9H9L7 192 aaPredicted RBP11.79□□□□□ -0.52
USP49-201ENST00000373006 ELOA3CA0A087WX78 387 aaPredicted RBP11.79□□□□□ -0.52
USP49-201ENST00000373006 RPL36A-HNRNPH2H7BZ11 118 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 PDCD6O75340 191 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 SCTP09683 121 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 OR4A8P0C604 315 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 PLA2G5P39877 138 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 TRA2AQ13595 282 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP49-201ENST00000373006 C10orf128Q5T292 105 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 RAET1LQ5VY80 246 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 ARHGAP21Q5T5U3 1957 aa11.79□□□□□ -0.52
USP49-201ENST00000373006 EXPH5Q8NEV8 1989 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 IGKV1D-13A0A0B4J2D9 117 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 A8MWP6 167 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 CELA2AP08217 269 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 IGKV1-13P0DP09 117 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 FGF7P21781 194 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 H3F3AP84243 136 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 TMEM267Q0VDI3 215 aaPredicted RBP11.78□□□□□ -0.52
USP49-201ENST00000373006 KIAA2026Q5HYC2 2103 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 SP5Q6BEB4 398 aaPredicted RBP11.78□□□□□ -0.52
USP49-201ENST00000373006 RHBDD2Q6NTF9 364 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 BTNL3Q6UXE8 466 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 RNF138Q8WVD3 245 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 C10orf35Q96D05 121 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 RBMXL1Q96E39 390 aaKnown RBP11.78□□□□□ -0.52
USP49-201ENST00000373006 SIGLEC12Q96PQ1 595 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 OR6C1Q96RD1 312 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 DEFB126Q9BYW3 111 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 TP53TG5Q9Y2B4 290 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 ZDBF2Q9HCK1 2354 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 ZNF705FA8MVS1 300 aaPredicted RBP11.78□□□□□ -0.52
USP49-201ENST00000373006 ZNF705DP0CH99 300 aaPredicted RBP11.78□□□□□ -0.52
USP49-201ENST00000373006 ZNF705BP0CI00 300 aaPredicted RBP11.78□□□□□ -0.52
USP49-201ENST00000373006 TFPI2P48307 235 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 ZNF468Q5VIY5 522 aaPredicted RBP11.78□□□□□ -0.52
USP49-201ENST00000373006 FAM90A2PQ658T7 463 aa11.78□□□□□ -0.52
USP49-201ENST00000373006 SLC25A26Q70HW3 274 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms