RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SLC23A3Q6PIS1 610 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 NHLRC1Q6VVB1 395 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 STPG2Q8N412 459 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 C20orf141Q9NUB4 165 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 SPRY1O43609 319 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 GALR1P47211 349 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 MVDP53602 400 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 RPS16P62249 146 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CBLN3Q6UW01 205 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CXorf67Q86X51 503 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CST7O76096 145 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 PTHLHP12272 177 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 SFTPA2Q8IWL1 248 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 SLC25A45Q8N413 288 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 NPEPL1Q8NDH3 523 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF391Q9UJN7 358 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 F5P12259 2224 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 PGA3P0DJD8 388 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 CCL3P10147 92 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZNF32P17041 273 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 MICBQ29980 383 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 BVESQ8NE79 360 aa11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
RAPGEF1-201ENST00000372189 C1QAP02745 245 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 SP1P08047 785 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 GNG3P63215 75 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 Q8IYB0 196 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 OR2J3O76001 311 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 SRSF9Q13242 221 aaKnown RBP eCLIP11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 NUFIP2Q7Z417 695 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 C9orf62Q8N4C0 152 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZG16BQ96DA0 208 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 DUS4LO95620 317 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 SELENOPP49908 381 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 TM4SF19Q96DZ7 209 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZFPL1O95159 310 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 SPSB1Q96BD6 273 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 TRMT61AQ96FX7 289 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 FAM210BQ96KR6 192 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 C4orf45Q96LM5 186 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 SF3B5Q9BWJ5 86 aaKnown RBP11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 TAAR3PQ9P1P4 343 aa11.75□□□□□ -0.53
RAPGEF1-201ENST00000372189 LINC00862A6NCI5 91 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 CRYBA1P05813 215 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 TNFAIP6P98066 277 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 CHRNA10Q9GZZ6 450 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 LOC390937A0A1W2PQ73 354 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 AGFG2O95081 481 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 CCL21O00585 134 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 RER1O15258 196 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 TMEM241Q24JQ0 296 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 GPR137Q96N19 417 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 ABHD1Q96SE0 405 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 FOXS1O43638 330 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 CDC14BO60729 498 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 FUT3P21217 361 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 CA6P23280 308 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 PSG6Q00889 435 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 RAB33BQ9H082 229 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 GPANK1O95872 356 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 ONECUT2O95948 504 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 EDARADDQ8WWZ3 215 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 TBX15Q96SF7 602 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 TECRQ9NZ01 308 aaKnown RBP11.74□□□□□ -0.53
RAPGEF1-201ENST00000372189 ADAP1O75689 374 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 CD200P41217 278 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 AMMECR1LQ6DCA0 310 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 DGAT2L6Q6ZPD8 337 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 OR1N2Q8NGR9 330 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 OR6X1Q8NH79 312 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 CCL17Q92583 94 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 NPAS1Q99742 590 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 UQCR10Q9UDW1 63 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 H3BP45 60 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 HRKO00198 91 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 ZFAND6Q6FIF0 208 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 GALMQ96C23 342 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 ATP5SQ99766 215 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 COMMD5Q9GZQ3 224 aa11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 MRPS18BQ9Y676 258 aaKnown RBP11.73□□□□□ -0.53
RAPGEF1-201ENST00000372189 SRP14P37108 136 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms