RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 H3BSH0 61 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 EIF1AYO14602 144 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CDC42EP2O14613 210 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 HSD17B6O14756 317 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SMPD2O60906 423 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 ZFAND5O76080 213 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 OR6A2O95222 327 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 GPANK1O95872 356 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CSTBP04080 98 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 RAB6AP20340 208 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 COX5AP20674 150 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SLC2A5P22732 501 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 EIF1AXP47813 144 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 C3AR1Q16581 482 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 PGGHGQ32M88 737 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 BBS1Q8NFJ9 593 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 OR52E2Q8NGJ4 325 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 ARHGDIGQ99819 225 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SLCO5A1Q9H2Y9 848 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 RBKSQ9H477 322 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 STRAPQ9Y3F4 350 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 DNAH9Q9NYC9 4486 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 TRAV30A0A087WSZ9 112 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 CEACAM18A8MTB9 384 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 H0YIZ8 118 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 SEC11BP0C7V7 166 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 OR3A2P47893 321 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF85Q03923 595 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 EGR4Q05215 589 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 RPL22L1Q6P5R6 122 aaKnown RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ARL9Q6T311 187 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 THSD4Q6ZMP0 1018 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 C11orf42Q8N5U0 333 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 OR51A2Q8NGJ7 313 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 TXN2Q99757 166 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 SRD5A3Q9H8P0 318 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 SLC7A11Q9UPY5 501 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ST3GAL6Q9Y274 331 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 RNF115Q9Y4L5 304 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 SERINC4A6NH21 518 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 J3QLW9 94 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 CCSO14618 274 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF264O43296 627 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 THBDP07204 575 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF19P17023 458 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 GRPRP30550 384 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 CHRNB4P30926 498 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 TAF9Q16594 264 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ODF4Q2M2E3 257 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 KRTAP21-3Q3LHN1 58 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 FAAP20Q6NZ36 180 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 MEPCEQ7L2J0 689 aaKnown RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 RAB39BQ96DA2 213 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 NELFAQ9H3P2 528 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF71Q9NQZ8 489 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 PSG11Q9UQ72 335 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 IER3IP1Q9Y5U9 82 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 IGKV1D-42A0A075B6H8 117 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF716A6NP11 495 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 F6UZH7 168 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 M0R036 132 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 CHRM2P08172 466 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 MAKP20794 623 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 RAC3P60763 192 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 GTF3C1Q12789 2109 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 OR7A5Q15622 319 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ABHD17BQ5VST6 288 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 DPY19L2P2Q6ZN68 376 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 IZUMO1Q8IYV9 350 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 GPR119Q8TDV5 335 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 SMPDL3BQ92485 455 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 RGP1Q92546 391 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ZMYND19Q96E35 227 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 JSRP1Q96MG2 331 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 ELL3Q9HB65 397 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 HINT3Q9NQE9 182 aaKnown RBP5.91□□□□□ -1.46
CSDE1-204ENST00000369530 STEAP1Q9UHE8 339 aa5.91□□□□□ -1.46
CSDE1-204ENST00000369530 LOC100509620A0A075B734 347 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 A0A1W2PPK0 400 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 SLC22A31A6NKX4 558 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 SLC6A6P31641 620 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 FHITP49789 147 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 SSR4P51571 173 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 SLC25A1P53007 311 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 OR5I1Q13606 314 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 CRMP1Q14194 572 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 TAF13Q15543 124 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 RAB11BQ15907 218 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 PCGF3Q3KNV8 242 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 FOXL2NBQ6ZUU3 175 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 MARCH3Q86UD3 253 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF101Q8IZC7 436 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 OR4D6Q8NGJ1 314 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 OR13C5Q8NGS8 318 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 SYNPRQ8TBG9 265 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 MOB3AQ96BX8 217 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 PBDC1Q9BVG4 233 aa5.9□□□□□ -1.46
CSDE1-204ENST00000369530 SRA1Q9HD15 236 aaKnown RBP5.9□□□□□ -1.46
CSDE1-204ENST00000369530 PLSCR4Q9NRQ2 329 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms