RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TRDCB7Z8K6 153 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 DEDDO75618 318 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 LHX2P50458 406 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 IGFBP7Q16270 282 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 MRGPRFQ96AM1 343 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 PIGBOS1A0A0B4J2F0 54 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 C3orf80F5H4A9 247 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 ZNF273Q14593 569 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 THNSL2Q86YJ6 484 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 PUSL1Q8N0Z8 303 aaKnown RBP9.63□□□□□ -0.87
SSU72-202ENST00000359060 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
SSU72-202ENST00000359060 SARAFQ96BY9 339 aa9.63□□□□□ -0.87
SSU72-202ENST00000359060 SAT2Q96F10 170 aaPredicted RBP9.63□□□□□ -0.87
SSU72-202ENST00000359060 CA11O75493 328 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 EDDM3BP56851 147 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 GUK1Q16774 197 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 MPV17LQ2QL34 196 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 RNF138Q8WVD3 245 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 ERGIC1Q969X5 290 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 MOB3AQ96BX8 217 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 REG4Q9BYZ8 158 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 C19orf12Q9NSK7 152 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 LAMA1P25391 3075 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 CEBPZOSA8MTT3 80 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 UMAD1C9J7I0 102 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 H7C1Q1 480 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 DKK1O94907 266 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 MUC1P15941 1255 aaPredicted RBP9.62□□□□□ -0.87
SSU72-202ENST00000359060 ALDH3B1P43353 468 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 LPAR6P43657 344 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 CLDN18P56856 261 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 IL13RA2Q14627 380 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 TCTEX1D2Q8WW35 142 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 TLNRD1Q9H1K6 362 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 TMEM100Q9NV29 134 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 LIPGQ9Y5X9 500 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 KPTNQ9Y664 436 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 CDRT15L2A8MXV6 281 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 CEACAM6P40199 344 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 SLC25A40Q8TBP6 338 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 TP53RKQ96S44 253 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 SMCO4Q9NRQ5 59 aa9.62□□□□□ -0.87
SSU72-202ENST00000359060 WDFY3Q8IZQ1 3526 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 GPR37O15354 613 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 CHST1O43916 411 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 KRASP01116 189 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 ELLP55199 621 aaPredicted RBP9.61□□□□□ -0.87
SSU72-202ENST00000359060 RPS16P62249 146 aaKnown RBP9.61□□□□□ -0.87
SSU72-202ENST00000359060 FOXO1Q12778 655 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 TMEM187Q14656 261 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 CXorf66Q5JRM2 361 aaPredicted RBP9.61□□□□□ -0.87
SSU72-202ENST00000359060 LCN15Q6UWW0 184 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 LYPD6Q86Y78 171 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 LHFPL5Q8TAF8 219 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 MUCL1Q96DR8 90 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 C1QTNF5Q9BXJ0 243 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 APC2O95996 2303 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 TRAV17A0A0B4J275 112 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 ZFP92A6NM28 416 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 GFRA1P56159 465 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 TMEM267Q0VDI3 215 aaPredicted RBP9.61□□□□□ -0.87
SSU72-202ENST00000359060 CATR1Q13166 79 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 OR8B8Q15620 311 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 AVPI1Q5T686 147 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 ADAM5Q6NVV9 412 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 DMRTA2Q96SC8 542 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 REPIN1Q9BWE0 567 aaKnown RBP9.61□□□□□ -0.87
SSU72-202ENST00000359060 UNKLQ9H9P5 680 aaKnown RBP9.61□□□□□ -0.87
SSU72-202ENST00000359060 CACNG5Q9UF02 275 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 ZNF724A8MTY0 619 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 J3QT63 122 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 IFNA17P01571 189 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 SELEP16581 610 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 VDAC1P21796 283 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 EWSR1Q01844 656 aaKnown RBP eCLIP9.61□□□□□ -0.875e-7■□□□□ 10.6
SSU72-202ENST00000359060 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
SSU72-202ENST00000359060 IZUMO4Q1ZYL8 232 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 OR5T1Q8NG75 326 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 OR10V1Q8NGI7 309 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 MTCH1Q9NZJ7 389 aa9.61□□□□□ -0.87
SSU72-202ENST00000359060 ZNF883P0CG24 379 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 FHITP49789 147 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 HIST1H3AP68431 136 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 MSMO1Q15800 293 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 HIST2H3PS2Q5TEC6 136 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 HIST2H3AQ71DI3 136 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 ZADH2Q8N4Q0 377 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 ADAMTS17Q8TE56 1095 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 BDP1A6H8Y1 2624 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 RRP8O43159 456 aaKnown RBP9.6□□□□□ -0.87
SSU72-202ENST00000359060 NFYBP25208 207 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 OR3A1P47881 315 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 HBG1P69891 147 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 HBG2P69892 147 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 RHEBQ15382 184 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 ZNF718Q3SXZ3 478 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 DEFB108BQ8NET1 73 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 PPP1R35Q8TAP8 253 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 TMEM45BQ96B21 275 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms