RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 A0A1B0GTQ1 180 aa12□□□□□ -0.49
VCP-201ENST00000358901 SEC14L6B5MCN3 397 aa12□□□□□ -0.49
VCP-201ENST00000358901 IL9P15248 144 aa12□□□□□ -0.49
VCP-201ENST00000358901 NAT1P18440 290 aa12□□□□□ -0.49
VCP-201ENST00000358901 EIF3IQ13347 325 aaKnown RBP12□□□□□ -0.49
VCP-201ENST00000358901 FAM78BQ5VT40 261 aa12□□□□□ -0.49
VCP-201ENST00000358901 C19orf48Q6RUI8 117 aa12□□□□□ -0.49
VCP-201ENST00000358901 MS4A10Q96PG2 267 aa12□□□□□ -0.49
VCP-201ENST00000358901 GPR132Q9UNW8 380 aa12□□□□□ -0.49
VCP-201ENST00000358901 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
VCP-201ENST00000358901 FAM74A7A6NL05 159 aa12□□□□□ -0.49
VCP-201ENST00000358901 C17orf51A8MQB3 221 aa12□□□□□ -0.49
VCP-201ENST00000358901 H3BQ15 152 aa12□□□□□ -0.49
VCP-201ENST00000358901 TOX4O94842 621 aa12□□□□□ -0.49
VCP-201ENST00000358901 MUC1P15941 1255 aaPredicted RBP12□□□□□ -0.49
VCP-201ENST00000358901 TNFRSF1AP19438 455 aa12□□□□□ -0.49
VCP-201ENST00000358901 FAM74A3Q4VXF1 159 aa12□□□□□ -0.49
VCP-201ENST00000358901 C1orf100Q5SVJ3 147 aa12□□□□□ -0.49
VCP-201ENST00000358901 CT55Q8WUE5 264 aa12□□□□□ -0.49
VCP-201ENST00000358901 CFHR5Q9BXR6 569 aa12□□□□□ -0.49
VCP-201ENST00000358901 NPDC1Q9NQX5 325 aaPredicted RBP12□□□□□ -0.49
VCP-201ENST00000358901 MYO16Q9Y6X6 1858 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 MAGEA5P43359 124 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 ARL16Q0P5N6 197 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 SNX22Q96L94 193 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 CRYM-AS1A6NIL9 109 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 KIAA1324LA8MWY0 1029 aaPredicted RBP11.99□□□□□ -0.49
VCP-201ENST00000358901 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.99□□□□□ -0.49
VCP-201ENST00000358901 OVCH2Q7RTZ1 564 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 OR2T10Q8NGZ9 312 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 WNT2BQ93097 391 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 SLC26A1Q9H2B4 701 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 ABCA1O95477 2261 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 PAX5Q02548 391 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 FOXO1Q12778 655 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 ATP6V1FQ16864 119 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 FAM27BQ5VT28 67 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 ZNF880Q6PDB4 577 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 MIOXQ9UGB7 285 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 PRSS50Q9UI38 385 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 TAF1LQ8IZX4 1826 aa11.99□□□□□ -0.49
VCP-201ENST00000358901 FCN1O00602 326 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 KLF4O43474 513 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 RPL29P47914 159 aaKnown RBP11.98□□□□□ -0.49
VCP-201ENST00000358901 SLC36A1Q7Z2H8 476 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 TMEM230Q96A57 120 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 CHRDL1Q9BU40 450 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 VAMP8Q9BV40 100 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 IL36GQ9NZH8 169 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 PATE3B3GLJ2 98 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 SLC31A2O15432 143 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 RRP8O43159 456 aaKnown RBP11.98□□□□□ -0.49
VCP-201ENST00000358901 FCGR3AP08637 254 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 OR2W1Q9Y3N9 320 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 DUXBA0A1W2PPF3 345 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 J3QT63 122 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
VCP-201ENST00000358901 RHOBP62745 196 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 RUNX1Q01196 453 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 TMEM255AQ5JRV8 349 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 KLHDC1Q8N7A1 406 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 DTD1Q8TEA8 209 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 PARD6AQ9NPB6 346 aa11.98□□□□□ -0.49
VCP-201ENST00000358901 TRGV8A0A0C4DH27 118 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 MBPP02686 304 aaPredicted RBP11.97□□□□□ -0.49
VCP-201ENST00000358901 CELA2AP08217 269 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 FCARP24071 287 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 PMELP40967 661 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 OPRK1P41145 380 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 MOB3BQ86TA1 216 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 TMEM56Q96MV1 263 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
VCP-201ENST00000358901 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 NDUFB3O43676 98 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 GYPAP02724 150 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 G0S2P27469 103 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 VAMP3Q15836 100 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 RNF151Q2KHN1 245 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 VMA21Q3ZAQ7 101 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 OR5A2Q8NGI9 324 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 IL22RA2Q969J5 263 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 ZNF488Q96MN9 340 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 MSL2Q9HCI7 577 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 OR1A1Q9P1Q5 309 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 SLC45A2Q9UMX9 530 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 NEUROG3Q9Y4Z2 214 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 SIPA1L1O43166 1804 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 KIF26BQ2KJY2 2108 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 LY86O95711 162 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 P2RY4P51582 365 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 TMEM50BP56557 158 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 HIKESHIQ53FT3 197 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
VCP-201ENST00000358901 SLC24A4Q8NFF2 622 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 PARP14Q460N5 1801 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 A0A0U1RQV5 110 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 MS4A18H0YCH9 400 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms