RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 XRCC3O43542 346 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 CA11O75493 328 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 LIPFP07098 398 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 GLP1RP43220 463 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 MEF2CQ06413 473 aaPredicted RBP12.59□□□□□ -0.39
TPM1-206ENST00000358278 CNPY1Q3B7I2 92 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 DCAF12L2Q5VW00 463 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 OLFML2AQ68BL7 652 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
TPM1-206ENST00000358278 TMUB1Q9BVT8 246 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 MIXL1Q9H2W2 232 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 MMP26Q9NRE1 261 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 ONECUT1Q9UBC0 465 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
TPM1-206ENST00000358278 SONP18583 2426 aaKnown RBP12.59□□□□□ -0.39
TPM1-206ENST00000358278 TRGV10A0A0A0MS01 117 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 A0A0G2JMP0 313 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 A0A0X1KG70 313 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 A0A1W2PPH5 198 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 TMEM235A6NFC5 223 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
TPM1-206ENST00000358278 CD3GP09693 182 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 S100A5P33763 92 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 MNDAP41218 407 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 ARFRP1Q13795 201 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 CDNFQ49AH0 187 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 OR4M2Q8NGB6 313 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 OR6C3Q9NZP0 311 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 TRAPPC2LQ9UL33 140 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 KCNK7Q9Y2U2 307 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 LINC00312Q9Y6C7 94 aa12.58□□□□□ -0.4
TPM1-206ENST00000358278 DVL1P1P54792 670 aaPredicted RBP12.57□□□□□ -0.4
TPM1-206ENST00000358278 PAX2Q02962 417 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 MADCAM1Q13477 382 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 ZNF273Q14593 569 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 TMEM200BQ69YZ2 307 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 ZNF565Q8N9K5 539 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 OR4K15Q8NH41 348 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 CCDC107Q8WV48 283 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 HDHD3Q9BSH5 251 aaPredicted RBP12.57□□□□□ -0.4
TPM1-206ENST00000358278 C12orf4Q9NQ89 552 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPM1-206ENST00000358278 MRPS7Q9Y2R9 242 aaKnown RBP12.57□□□□□ -0.4
TPM1-206ENST00000358278 INSIG2Q9Y5U4 225 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 KIR2DS1A0A191URI9 304 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 MT-ND4P03905 459 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 FOSL1P15407 271 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 GATA3P23771 443 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 TAS2R20P59543 309 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 GNG2P59768 71 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 ZNF260Q3ZCT1 412 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 HACD4Q5VWC8 232 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 TCF23Q7RTU1 214 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 LY6G5BQ8NDX9 201 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 SETD6Q8TBK2 473 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 MRPL30Q8TCC3 161 aaKnown RBP12.57□□□□□ -0.4
TPM1-206ENST00000358278 MRGPRDQ8TDS7 321 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
TPM1-206ENST00000358278 ZNF714Q96N38 554 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 NCOR1P1Q9H4R4 102 aa12.57□□□□□ -0.4
TPM1-206ENST00000358278 ELF5Q9UKW6 265 aaPredicted RBP12.57□□□□□ -0.4
TPM1-206ENST00000358278 UBE2J1Q9Y385 318 aaPredicted RBP12.57□□□□□ -0.4
TPM1-206ENST00000358278 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 CD5LO43866 347 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 CLPXO76031 633 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 CCL3L1P16619 93 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 ARF6P62330 175 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 METTL11BQ5VVY1 283 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 FAHD2BQ6P2I3 314 aaPredicted RBP12.56□□□□□ -0.4
TPM1-206ENST00000358278 GAPTQ8N292 157 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 OR13A1Q8NGR1 328 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 FAHD2AQ96GK7 314 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 DMRTB1Q96MA1 342 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 GAL3ST2Q9H3Q3 398 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 RIMS4Q9H426 269 aaPredicted RBP12.56□□□□□ -0.4
TPM1-206ENST00000358278 AUNIPQ9H7T9 357 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 KCNS2Q9ULS6 477 aa12.56□□□□□ -0.4
TPM1-206ENST00000358278 HIVEP2P31629 2446 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 NAPSAO96009 420 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 PITPNAQ00169 270 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 PNLIPRP3Q17RR3 467 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 C6orf183Q5T699 404 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 SNX29P2Q8IUI4 249 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 NUDCD2Q8WVJ2 157 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 WDFY2Q96P53 400 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 SMR3AQ99954 134 aa12.55□□□□□ -0.4
TPM1-206ENST00000358278 hCG_1809904A0A1W2PP81 198 aa12.54□□□□□ -0.4
TPM1-206ENST00000358278 A0A1W2PPE2 198 aa12.54□□□□□ -0.4
TPM1-206ENST00000358278 A0A1W2PR64 198 aa12.54□□□□□ -0.4
TPM1-206ENST00000358278 A0A1W2PRV1 198 aa12.54□□□□□ -0.4
TPM1-206ENST00000358278 PTHLHP12272 177 aa12.54□□□□□ -0.4
TPM1-206ENST00000358278 RCC1P18754 421 aaPredicted RBP12.54□□□□□ -0.4
TPM1-206ENST00000358278 TNFSF8P32971 234 aa12.54□□□□□ -0.4
TPM1-206ENST00000358278 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
TPM1-206ENST00000358278 TRAT1Q6PIZ9 186 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms