RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CRTAPO75718 401 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-201ENST00000355766 DHFRP00374 187 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 NGFP01138 241 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 CD3GP09693 182 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 TMEM225BP0DP42 221 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF250P15622 560 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 CCNOP22674 350 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 PTAFRP25105 342 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 HLA-DMAP28067 261 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 BTCP35070 178 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 GLRXP35754 106 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 EFNA4P52798 201 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 PTTG1IPP53801 180 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 TAS2R46P59540 309 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 FGF12P61328 243 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 NAAAQ02083 359 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 CDK10Q15131 360 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 RBMS2Q15434 407 aaKnown RBP5.83□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF718Q3SXZ3 478 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 SLC22A6Q4U2R8 563 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 MIDNQ504T8 468 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 VAX1Q5SQQ9 334 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 TMEM108Q6UXF1 575 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 Q6ZS49 121 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 BTN2A1Q7KYR7 527 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 OSR2Q8N2R0 312 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 ARRDC1Q8N5I2 433 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 TMEM104Q8NE00 496 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 OR8G5Q8NG78 346 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 KLF14Q8TD94 323 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-201ENST00000355766 ASB13Q8WXK3 278 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 RADILQ96JH8 1075 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 PRRT1Q99946 306 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 PIMREGQ9BSJ6 248 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 RIMS4Q9H426 269 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF442Q9H7R0 627 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 MYOZ1Q9NP98 299 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-201ENST00000355766 TREM2Q9NZC2 230 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 PTTG3PQ9NZH4 202 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 RCC2Q9P258 522 aaKnown RBP5.83□□□□□ -1.48
VPS13A-201ENST00000355766 CADP27708 2225 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 IGKV1-27A0A075B6S5 117 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 A0A1B0GVG6 124 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 FAM230AA0A1W2PPH8 454 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF850A8MQ14 1090 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 CEACAM18A8MTB9 384 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 E7EQL1 145 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 HOXA3O43365 443 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 PEX14O75381 377 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 LY6HO94772 140 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 NDUFB6O95139 128 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 DIRAS3O95661 229 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 IGHV3-13P01766 116 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 TCRBP04435 133 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 ZFP36P26651 326 aaKnown RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 GCH1P30793 250 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 CFHR2P36980 270 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 PDLIM4P50479 330 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 RBM11P57052 281 aaKnown RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 RAB25P57735 213 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 GNG2P59768 71 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 SELENOVP59797 346 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 PAX5Q02548 391 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 SURF2Q15527 256 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 PCGF3Q3KNV8 242 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 CDNFQ49AH0 187 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 SPIN3Q5JUX0 258 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 FAHD2BQ6P2I3 314 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 FIP1L1Q6UN15 594 aaKnown RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 MOB3CQ70IA8 216 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF554Q86TJ5 538 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 FAM90A1Q86YD7 464 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 FBXL14Q8N1E6 418 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 MUC15Q8N387 334 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 OR1J1Q8NGS3 322 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 OR8S1Q8NH09 359 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 OR51F2Q8NH61 342 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 PIGCQ92535 297 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 UPRTQ96BW1 309 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 FAHD2AQ96GK7 314 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 DHRS9Q9BPW9 319 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 ADAT1Q9BUB4 502 aaKnown RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 OR2J1Q9GZK6 312 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 ALX4Q9H161 411 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 OR51I2Q9H344 312 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 HRASLSQ9HDD0 168 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 SCP2D1Q9UJQ7 156 aa5.82□□□□□ -1.48
VPS13A-201ENST00000355766 PURGQ9UJV8 347 aaKnown RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 FBXO9Q9UK97 447 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
VPS13A-201ENST00000355766 TRBV6-6A0A0A6YYG2 114 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 MEIOCA2RUB1 952 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 TMEM235A6NFC5 223 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 A6NIN4 97 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SNRPGP15A8MWD9 76 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 DISC1C4P0D8 188 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 INMT-MINDY4F8WBC2 141 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 TRAPPC2LH3BP13 241 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 PDCD6O75340 191 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 IL5P05113 134 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms