RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZNF260Q3ZCT1 412 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 ANKRD10Q9NXR5 420 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 CRYABP02511 175 aaKnown RBP17.18■□□□□ 0.34
HDAC4-201ENST00000345617 ZNF296Q8WUU4 475 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-201ENST00000345617 MBD3L1Q8WWY6 194 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 C1RLQ9NZP8 487 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 C10orf113Q5VZT2 155 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 TEPPQ6URK8 271 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 ARL6IP6Q8N6S5 226 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 RHNO1Q9BSD3 238 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 PKIBQ9C010 78 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 OR4C3Q8NH37 302 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 CNTD2Q9H8S5 307 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 THADAQ6YHU6 1953 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 IER3P46695 156 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 ADIPOQQ15848 244 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 HFEQ30201 348 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 C1QTNF12Q5T7M4 302 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 MUC15Q8N387 334 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 GBGT1Q8N5D6 347 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 SPANXA1Q9NS26 97 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 HCFC2Q9Y5Z7 792 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.17■□□□□ 0.34
HDAC4-201ENST00000345617 FCGR3BO75015 233 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 KLKB1P03952 638 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 AGERQ15109 404 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 RBM14Q96PK6 669 aaKnown RBP17.17■□□□□ 0.34
HDAC4-201ENST00000345617 IGLV3-25P01717 112 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 KCNAB1Q14722 419 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 TMEM136Q6ZRR5 245 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 OR2Z1Q8NG97 314 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 ISOC2Q96AB3 205 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 PEF1Q9UBV8 284 aaKnown RBP17.17■□□□□ 0.34
HDAC4-201ENST00000345617 DNAL4O96015 105 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 CD40P25942 277 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 METTL1Q9UBP6 276 aaKnown RBP17.17■□□□□ 0.34
HDAC4-201ENST00000345617 LINC01553A4QN01 128 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 DHRS7CA6NNS2 312 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 ZGLP1P0C6A0 271 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 SMIM14Q96QK8 99 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 TMEM208Q9BTX3 173 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 HES7Q9BYE0 225 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 MPC1Q9Y5U8 109 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 MTCH2Q9Y6C9 303 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 TCRBV16S1A1N1A0A5B0 115 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 WNT3P56703 355 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 DDA1Q9BW61 102 aa17.17■□□□□ 0.34
HDAC4-201ENST00000345617 DNASE2O00115 360 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-201ENST00000345617 OR3A4PP47883 348 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 TWIST1Q15672 202 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 MEF2BQ02080 365 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-201ENST00000345617 LYG1Q8N1E2 194 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 SGMS2Q8NHU3 365 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 DSPPQ9NZW4 1301 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 GUCD1Q96NT3 240 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 LTB4R2Q9NPC1 389 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 ELF5Q9UKW6 265 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-201ENST00000345617 C17orf99Q6UX52 265 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 CRXO43186 299 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-201ENST00000345617 A0A1W2PNR3 127 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 NMUP48645 174 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 PAPPA-AS1Q5QFB9 102 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 SBF2Q86WG5 1849 aa17.16■□□□□ 0.34
HDAC4-201ENST00000345617 PCP4P48539 62 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 HYAL1Q12794 435 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 C16orf82Q7Z2V1 217 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 DNAJB12Q9NXW2 375 aaKnown RBP17.15■□□□□ 0.34
HDAC4-201ENST00000345617 PSG11Q9UQ72 335 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 NRG2O14511 850 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-201ENST00000345617 MSL2Q9HCI7 577 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 ADAP1O75689 374 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 COMPP49747 757 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-201ENST00000345617 LYZP61626 148 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 DOK5Q9P104 306 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 CES1P1Q9UKY3 287 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 CACNA1EQ15878 2313 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 CYR61O00622 381 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 NPBWR2P48146 333 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 CCL11P51671 97 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 AESQ08117 197 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 KLF9Q13886 244 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-201ENST00000345617 FBXO46Q6PJ61 603 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-201ENST00000345617 KCNE1BA0A087WTH5 132 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 ETHE1O95571 254 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 PSG5Q15238 335 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 ADAMTS17Q8TE56 1095 aa17.15■□□□□ 0.34
HDAC4-201ENST00000345617 FOLR2P14207 255 aa17.14■□□□□ 0.34
HDAC4-201ENST00000345617 OLIG3Q7RTU3 272 aa17.14■□□□□ 0.34
HDAC4-201ENST00000345617 OR2I1PQ8NGU4 316 aa17.14■□□□□ 0.34
HDAC4-201ENST00000345617 MRGPRX3Q96LB0 322 aa17.14■□□□□ 0.34
HDAC4-201ENST00000345617 GLRX2Q9NS18 164 aa17.14■□□□□ 0.34
HDAC4-201ENST00000345617 PPP1R17O96001 155 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 CXCL3P19876 107 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 ISXQ2M1V0 245 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 TMEM255AQ5JRV8 349 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 R3HDM4Q96D70 268 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 OR5AC2Q9NZP5 309 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 GLULP15104 373 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 TCL1AP56279 114 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms