RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ING3Q9NXR8 418 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 A0A0A6YYH2 397 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 MEIS3P1A6NDR6 274 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 A6NJ64 397 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 FOXI3A8MTJ6 420 aaPredicted RBP11.4□□□□□ -0.58
TPM4-202ENST00000344824 PDCD6O75340 191 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 HLA-DQB1P01920 261 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 SELLP14151 372 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
TPM4-202ENST00000344824 CHATP28329 748 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 GUCA2AQ02747 115 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 COL10A1Q03692 680 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 ZNF146Q15072 292 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 ZNF260Q3ZCT1 412 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 SPIN3Q5JUX0 258 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 CD276Q5ZPR3 534 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 Q6P435 159 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 LINC00596Q86U02 117 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 CD177Q8N6Q3 437 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 H1FXQ92522 213 aaKnown RBP11.4□□□□□ -0.58
TPM4-202ENST00000344824 SOSTQ9BQB4 213 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 FAAP24Q9BTP7 215 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 SRRQ9GZT4 340 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
TPM4-202ENST00000344824 AUNIPQ9H7T9 357 aa11.4□□□□□ -0.58
TPM4-202ENST00000344824 STAB1Q9NY15 2570 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 TRAV24A0A0B4J272 114 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A10PA6NDY2 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A18PA6NE21 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A16PA6NEW6 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A20PA6NIJ5 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A8PA6NJQ4 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A7PA6NKC0 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A22PA8MWA6 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A12PA8MX19 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A5PA8MXJ8 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A23PA8MXZ1 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 NDUFB3O43676 98 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 VENTXO95231 258 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FCER2P06734 321 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A15PP0C7V4 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A13PP0C7W8 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A14PP0C7W9 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FAM90A24PP0C7X0 464 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FUT3P21217 361 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 FPR2P25090 351 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 PRDX2P32119 198 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 DGCR2P98153 550 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 PITPNAQ00169 270 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 PAX2Q02962 417 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 ARFRP1Q13795 201 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 PAN3Q58A45 887 aaKnown RBP11.39□□□□□ -0.59
TPM4-202ENST00000344824 STUMQ69YW2 141 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 BTN2A1Q7KYR7 527 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 OR8H2Q8N162 312 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 ASCC1Q8N9N2 400 aaKnown RBP11.39□□□□□ -0.59
TPM4-202ENST00000344824 SUMF2Q8NBJ7 301 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 NUDCD2Q8WVJ2 157 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 SULT4A1Q9BR01 284 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 C19orf24Q9BVV8 132 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 SUCNR1Q9BXA5 334 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 CHST6Q9GZX3 395 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 PPA2Q9H2U2 334 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 ZNF69Q9UC07 566 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 NUP50Q9UKX7 468 aa11.39□□□□□ -0.59
TPM4-202ENST00000344824 KIR2DS1A0A191URI9 304 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 MEIOCA2RUB1 952 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 SLC33A1O00400 549 aaPredicted RBP11.38□□□□□ -0.59
TPM4-202ENST00000344824 MFNGO00587 321 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 FSHBP01225 129 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 NDUFB7P17568 137 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 GNG2P59768 71 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 PAX8Q06710 450 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 LRRC10Q5BKY1 277 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 KLF17Q5JT82 389 aaPredicted RBP11.38□□□□□ -0.59
TPM4-202ENST00000344824 METTL11BQ5VVY1 283 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 Q8N402 240 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 TMEM185AQ8NFB2 350 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 GAFA1Q96PS6 74 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 SDHCQ99643 169 aaPredicted RBP11.38□□□□□ -0.59
TPM4-202ENST00000344824 HDHD3Q9BSH5 251 aaPredicted RBP11.38□□□□□ -0.59
TPM4-202ENST00000344824 DPCDQ9BVM2 203 aaPredicted RBP11.38□□□□□ -0.59
TPM4-202ENST00000344824 KAAG1Q9UBP8 84 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 AK3Q9UIJ7 227 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
TPM4-202ENST00000344824 TNFRSF13BO14836 293 aaPredicted RBP11.37□□□□□ -0.59
TPM4-202ENST00000344824 FCN3O75636 299 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 TOX4O94842 621 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 GSTP1P09211 210 aaKnown RBP11.37□□□□□ -0.59
TPM4-202ENST00000344824 CD3GP09693 182 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 PTBP1P26599 531 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM4-202ENST00000344824 PRSS3P35030 304 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 PPP5CP53041 499 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 IL13RA1P78552 427 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 ATXN7L3Q14CW9 347 aaPredicted RBP11.37□□□□□ -0.59
TPM4-202ENST00000344824 RBMS3Q6XE24 437 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms