RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 FIP1L1Q6UN15 594 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 SEC22CQ9BRL7 303 aa11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 PPA2Q9H2U2 334 aa11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 CBLN4Q9NTU7 201 aa11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
HERPUD1-202ENST00000344114 ARFGEF3Q5TH69 2177 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 IGLV3-9A0A075B6K5 115 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 CEACAM18A8MTB9 384 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 ATP6V1G2-DDX39BF2Z307 99 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 F8VVB4 439 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 F8VWA3 439 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 H0YL77 283 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 NOS1APO75052 506 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 RHBDL1O75783 438 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 ANXA3P12429 323 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 SRD5A1P18405 259 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 TAS2R31P59538 309 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 TSPAN5P62079 268 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 GRK1Q15835 563 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 FAHD2BQ6P2I3 314 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 Q6ZR03 302 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 BATF2Q8N1L9 274 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 SPICQ8N5J4 248 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 ZNF525Q8N782 197 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 POC1AQ8NBT0 407 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 TERB2Q8NHR7 220 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 GTF3AQ92664 365 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 FAHD2AQ96GK7 314 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 CYYR1Q96J86 154 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 FYTTD1Q96QD9 318 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 HDHD3Q9BSH5 251 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 EHFQ9NZC4 300 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 ZNF230Q9UIE0 474 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 ANXA10Q9UJ72 324 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 POU2F3Q9UKI9 436 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 FZR1Q9UM11 496 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 VSIG4Q9Y279 399 aa11.33□□□□□ -0.6
HERPUD1-202ENST00000344114 MCRIP1C9JLW8 97 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 ABCD4O14678 606 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 WIPF1O43516 503 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 FPR2P25090 351 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 MDH2P40926 338 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 CD200P41217 278 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 SELENOVP59797 346 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 UBE2MP61081 183 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 RBM39Q14498 530 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 SPIN3Q5JUX0 258 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 Q6ZS49 121 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 OVCH2Q7RTZ1 564 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 LHFPL1Q86WI0 220 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 OR11H7Q8NGC8 314 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 C10orf105Q8TEF2 133 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 MAFIPQ8WZ33 124 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 FAM168AQ92567 244 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 MRGPRFQ96AM1 343 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 ZNF488Q96MN9 340 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 NRIP2Q9BQI9 281 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 RIMS4Q9H426 269 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 HES4Q9HCC6 221 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 NECAP2Q9NVZ3 263 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 ZNF222Q9UK12 451 aa11.32□□□□□ -0.6
HERPUD1-202ENST00000344114 OR2AT4A6NND4 320 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 POM121CA8CG34 1229 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 E7EQL1 145 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 F5H5P2 479 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 CDIPTO14735 213 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 NXPH2O95156 264 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 C1QBP02746 253 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 GRPP07492 148 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 OR4E1P0C645 316 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 PDCD1Q15116 288 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 SURF2Q15527 256 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 C4orf46Q504U0 113 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 TMED4Q7Z7H5 227 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 PEG10Q86TG7 708 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 ZNF431Q8TF32 576 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 DYRK2Q92630 601 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 DMRTB1Q96MA1 342 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 DHRS9Q9BPW9 319 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 CHMP1AQ9HD42 196 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 NPTNQ9Y639 398 aa11.31□□□□□ -0.6
HERPUD1-202ENST00000344114 IGKV1D-8A0A087WSZ0 117 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 MEIKINA0A087WXM9 373 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 TRBV6-6A0A0A6YYG2 114 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 PLSCR5A0PG75 271 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 A6NLC8 198 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 PTBP3O95758 552 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 NAPSAO96009 420 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 USF1P22415 310 aaPredicted RBP11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 ZNF146Q15072 292 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 MSMPQ1L6U9 139 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 Q6P435 159 aa11.3□□□□□ -0.6
HERPUD1-202ENST00000344114 SLC22A25Q6T423 547 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms