RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SHPKQ9UHJ6 478 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 NPIPB9F8W1W9 429 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 SYNGR1O43759 233 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 OR2H2O95918 312 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 CELA3BP08861 270 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 BTG1P62324 171 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 DMKNQ6E0U4 476 aaPredicted RBP11.03□□□□□ -0.64
LIN54-201ENST00000340417 IGFL3Q6UXB1 125 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 DNAJC13O75165 2243 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 PPT1P50897 306 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 STARD4Q96DR4 205 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 SEC22CQ9BRL7 303 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 GON7Q9BXV9 100 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 AGPAT2O15120 278 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 FBP1P09467 338 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 APELAP0DMC3 54 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 PAFAH1B2P68402 229 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 CYB5R2Q6BCY4 276 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 SLC25A42Q86VD7 318 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 HSD17B10Q99714 261 aaKnown RBP11.02□□□□□ -0.64
LIN54-201ENST00000340417 WFDC6Q9BQY6 131 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 PKIBQ9C010 78 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.02□□□□□ -0.64
LIN54-201ENST00000340417 NPIPB13A6NJU9 1138 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 NPIPB4C9JG80 1138 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 RAB29O14966 203 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 MUC1P15941 1255 aaPredicted RBP11.02□□□□□ -0.64
LIN54-201ENST00000340417 RBM11P57052 281 aaKnown RBP11.02□□□□□ -0.64
LIN54-201ENST00000340417 C8orf82Q6P1X6 216 aaPredicted RBP11.02□□□□□ -0.64
LIN54-201ENST00000340417 NAA40Q86UY6 237 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 ZNF649Q9BS31 505 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 PLSCR4Q9NRQ2 329 aa11.02□□□□□ -0.64
LIN54-201ENST00000340417 ABHD12Q8N2K0 398 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 PPIL3Q9H2H8 161 aaKnown RBP11.02□□□□□ -0.65
LIN54-201ENST00000340417 ZDHHC11Q9H8X9 412 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 SH2D2AQ9NP31 389 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 RPL36A-HNRNPH2H7BZ11 118 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 GNG7O60262 68 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 PPP1CCP36873 323 aaKnown RBP11.02□□□□□ -0.65
LIN54-201ENST00000340417 BLOC1S1P78537 153 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 NINQ8N4C6 2090 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 USF1P22415 310 aaPredicted RBP11.02□□□□□ -0.65
LIN54-201ENST00000340417 CSRP3P50461 194 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 IDI2-AS1Q9NZ38 188 aa11.02□□□□□ -0.65
LIN54-201ENST00000340417 EFNA4P52798 201 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 FGF12P61328 243 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 GUCA2BQ16661 112 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 FAM166AQ6J272 317 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 TMEM231Q9H6L2 316 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 SOCS1O15524 211 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 CT45A10P0DMU9 189 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 TMEM33P57088 247 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 RHOBP62745 196 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 RPS27AP62979 156 aaKnown RBP11.01□□□□□ -0.65
LIN54-201ENST00000340417 NRN1LQ496H8 165 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 OR5H6Q8NGV6 325 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 OR7C2O60412 319 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 HSD17B11Q8NBQ5 300 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 KCNK15Q9H427 330 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 IGKV3-7A0A075B6H7 116 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 GALP22466 123 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 LOXL3P58215 753 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 UBE2G1P62253 170 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 FAM3AP98173 230 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 UNQ9370/PRO34162Q6UXP9 181 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 P2RX4Q99571 388 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 SOX7Q9BT81 388 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 CTAG2O75638 210 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 HTD2P86397 168 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 SPINK9Q5DT21 86 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 MFSD4AQ8N468 514 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 FAM213BQ8TBF2 198 aa11.01□□□□□ -0.65
LIN54-201ENST00000340417 MRPL22Q9NWU5 206 aaKnown RBP11.01□□□□□ -0.65
LIN54-201ENST00000340417 SP6Q3SY56 376 aa11□□□□□ -0.65
LIN54-201ENST00000340417 MRPL37Q9BZE1 423 aaKnown RBP11□□□□□ -0.65
LIN54-201ENST00000340417 TECTAO75443 2155 aa11□□□□□ -0.65
LIN54-201ENST00000340417 IGHG3P01860 377 aa11□□□□□ -0.65
LIN54-201ENST00000340417 NPBWR1P48145 328 aa11□□□□□ -0.65
LIN54-201ENST00000340417 DRAXINQ8NBI3 349 aaPredicted RBP11□□□□□ -0.65
LIN54-201ENST00000340417 IGHA1P01876 353 aa11□□□□□ -0.65
LIN54-201ENST00000340417 S100A9P06702 114 aaKnown RBP11□□□□□ -0.65
LIN54-201ENST00000340417 MC5RP33032 325 aa11□□□□□ -0.65
LIN54-201ENST00000340417 KLK11Q9UBX7 282 aa11□□□□□ -0.65
LIN54-201ENST00000340417 IGHV1-18A0A0C4DH31 117 aa11□□□□□ -0.65
LIN54-201ENST00000340417 MBD3L4A6NDZ8 208 aaPredicted RBP11□□□□□ -0.65
LIN54-201ENST00000340417 MBD3L3A6NE82 208 aaPredicted RBP11□□□□□ -0.65
LIN54-201ENST00000340417 MBD3L5A6NJ08 208 aaPredicted RBP11□□□□□ -0.65
LIN54-201ENST00000340417 CXorf66Q5JRM2 361 aaPredicted RBP11□□□□□ -0.65
LIN54-201ENST00000340417 OR4A4PQ8NGN8 299 aa11□□□□□ -0.65
LIN54-201ENST00000340417 OR4C13Q8NGP0 309 aa11□□□□□ -0.65
LIN54-201ENST00000340417 MBD3L2Q8NHZ7 208 aaPredicted RBP11□□□□□ -0.65
LIN54-201ENST00000340417 DYRK2Q92630 601 aa11□□□□□ -0.65
LIN54-201ENST00000340417 OR4C12Q96R67 309 aa11□□□□□ -0.65
LIN54-201ENST00000340417 C11orf54Q9H0W9 315 aaPredicted RBP11□□□□□ -0.65
LIN54-201ENST00000340417 TSC2P49815 1807 aa11□□□□□ -0.65
LIN54-201ENST00000340417 C3orf85A0A1B0GTC6 90 aa11□□□□□ -0.65
LIN54-201ENST00000340417 ODAMA1E959 279 aa11□□□□□ -0.65
LIN54-201ENST00000340417 NUPL2O15504 423 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms