RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 SYNGR1O43759 233 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 TUSC2O75896 110 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 PRH1P02810 166 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 PRKACAP17612 351 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 UCP2P55851 309 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 EWSR1Q01844 656 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 HMGN3Q15651 99 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 TSC22D1Q15714 1073 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 LINC00596Q86U02 117 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 SELENOHQ8IZQ5 122 aaKnown RBP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 HSD17B11Q8NBQ5 300 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 LOXL4Q96JB6 756 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 SH3BGRL3Q9H299 93 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 SPACA1Q9HBV2 294 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 STRAPQ9Y3F4 350 aaKnown RBP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 PPT1P50897 306 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 PEA15Q15121 130 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 NUFIP2Q7Z417 695 aaKnown RBP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 OR10Z1Q8NGY1 313 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 GTF3AQ92664 365 aaKnown RBP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 C11orf1Q9H5F2 150 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 C19orf12Q9NSK7 152 aa12.89□□□□□ -0.35
TNFSF13-201ENST00000338784 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 DUXBA0A1W2PPF3 345 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 GPR37O15354 613 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 SP1P08047 785 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 APLNRP35414 380 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 FHITP49789 147 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 MEOX1P50221 254 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 C3AR1Q16581 482 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 GUK1Q16774 197 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 ZNF573Q86YE8 665 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 CMTM1Q8IZ96 169 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 SUMF2Q8NBJ7 301 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 SUMF1Q8NBK3 374 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 MPC1Q9Y5U8 109 aa12.88□□□□□ -0.35
TNFSF13-201ENST00000338784 IGKV1-6A0A0C4DH72 117 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 FAM24AA6NFZ4 105 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 HSD17B6O14756 317 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 ADAM20O43506 726 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 ZNF266Q14584 549 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 LURAP1LQ8IV03 231 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 ABHD14BQ96IU4 210 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 EIF5A2Q9GZV4 153 aaKnown RBP12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 CCL28Q9NRJ3 127 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 GPR179Q6PRD1 2367 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 SHANK1Q9Y566 2161 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 OR5B21A6NL26 309 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 KLRC4-KLRK1H3BQV0 150 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 C1QL1O75973 258 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 VDAC1P21796 283 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 UCP1P25874 307 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 WNT5AP41221 380 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 ASCL1P50553 236 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 GNG3P63215 75 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 CLN3Q13286 438 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 MRPL30Q8TCC3 161 aaKnown RBP12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 SLC25A31Q9H0C2 315 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 PLEKHF2Q9H8W4 249 aa12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 LYRM2Q9NU23 88 aaPredicted RBP12.87□□□□□ -0.35
TNFSF13-201ENST00000338784 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 IGSF23A1L1A6 192 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 HS3ST1O14792 307 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 SSSCA1O60232 199 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 SFTPCP11686 197 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 CD59P13987 128 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 RAB13P51153 203 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 VAMP2P63027 116 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 HIKESHIQ53FT3 197 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 AVPI1Q5T686 147 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 ZNF488Q96MN9 340 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 GPHA2Q96T91 129 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 C12orf49Q9H741 205 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 SMCO4Q9NRQ5 59 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 IL17BQ9UHF5 180 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 PRSS50Q9UI38 385 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 ZNF175Q9Y473 711 aa12.86□□□□□ -0.35
TNFSF13-201ENST00000338784 NCOR2Q9Y618 2525 aa12.85□□□□□ -0.35
TNFSF13-201ENST00000338784 MEX3AA1L020 520 aaKnown RBP12.85□□□□□ -0.35
TNFSF13-201ENST00000338784 LILRA1O75019 489 aa12.85□□□□□ -0.35
TNFSF13-201ENST00000338784 PITX3O75364 302 aa12.85□□□□□ -0.35
TNFSF13-201ENST00000338784 MT-CO3P00414 261 aa12.85□□□□□ -0.35
TNFSF13-201ENST00000338784 IL24Q13007 206 aa12.85□□□□□ -0.35
TNFSF13-201ENST00000338784 CLINT1Q14677 625 aa12.85□□□□□ -0.35
TNFSF13-201ENST00000338784 SLC10A1Q14973 349 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms