RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 DHRS7BQ6IAN0 325 aaPredicted RBP12.03□□□□□ -0.48
RTN4-202ENST00000337526 BTNL3Q6UXE8 466 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 OR10AD1Q8NGE0 317 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 DTD1Q8TEA8 209 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 VPS25Q9BRG1 176 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 OR6C3Q9NZP0 311 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 OR2W1Q9Y3N9 320 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 CACNA1DQ01668 2161 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 NGFRP08138 427 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 OR5A2Q8NGI9 324 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 NRIP2Q9BQI9 281 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 LPAR5Q9H1C0 372 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 SH2D2AQ9NP31 389 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 RCC2Q9P258 522 aaKnown RBP12.03□□□□□ -0.48
RTN4-202ENST00000337526 TINAGQ9UJW2 476 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 DNPH1O43598 174 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 LIFP15018 202 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 PLPPR5Q32ZL2 321 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 RGP1Q92546 391 aaPredicted RBP12.03□□□□□ -0.48
RTN4-202ENST00000337526 A0A1B0GTQ1 180 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 B4DEV8 164 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 J3QT63 122 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 ZNF260Q3ZCT1 412 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 OR5D13Q8NGL4 314 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 CT55Q8WUE5 264 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 CXXC4Q9H2H0 198 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 OR1A1Q9P1Q5 309 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 YTHDF2Q9Y5A9 579 aaKnown RBP12.03□□□□□ -0.48
RTN4-202ENST00000337526 IGHV5-10-1A0A0J9YXX1 117 aa12.02□□□□□ -0.48
RTN4-202ENST00000337526 IL11P20809 199 aa12.02□□□□□ -0.48
RTN4-202ENST00000337526 G0S2P27469 103 aa12.02□□□□□ -0.48
RTN4-202ENST00000337526 KLF3P57682 345 aaPredicted RBP12.02□□□□□ -0.48
RTN4-202ENST00000337526 SMUG1Q53HV7 270 aa12.02□□□□□ -0.48
RTN4-202ENST00000337526 IL22RA2Q969J5 263 aa12.02□□□□□ -0.48
RTN4-202ENST00000337526 R3HDM4Q96D70 268 aa12.02□□□□□ -0.48
RTN4-202ENST00000337526 SNX22Q96L94 193 aa12.02□□□□□ -0.48
RTN4-202ENST00000337526 ZNF98A6NK75 572 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 SMIM6P0DI80 62 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 RPS4Y1P22090 263 aaKnown RBP12.02□□□□□ -0.49
RTN4-202ENST00000337526 PMELP40967 661 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 NHLH2Q02577 135 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 FAM27BQ5VT28 67 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 ZNF880Q6PDB4 577 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 OR10A7Q8NGE5 316 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 OR4S2Q8NH73 311 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 FKBP11Q9NYL4 201 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 GPR132Q9UNW8 380 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 hADV38S2A0JD32 116 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 TSPAN2O60636 221 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
RTN4-202ENST00000337526 MAGEA5P43359 124 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 CRYBA2P53672 197 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 GUCA2BQ16661 112 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 MRGPRGQ86SM5 289 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 CCL17Q92583 94 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 ZNF501Q96CX3 271 aaPredicted RBP12.02□□□□□ -0.49
RTN4-202ENST00000337526 SDHCQ99643 169 aaPredicted RBP12.02□□□□□ -0.49
RTN4-202ENST00000337526 OR5AC2Q9NZP5 309 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 MIOXQ9UGB7 285 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 RBP4P02753 201 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 MRPS11P82912 194 aaKnown RBP12.02□□□□□ -0.49
RTN4-202ENST00000337526 C3AR1Q16581 482 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 C1orf100Q5SVJ3 147 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 FNDC7Q5VTL7 733 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 UNQ9370/PRO34162Q6UXP9 181 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 FA2HQ7L5A8 372 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 SLC26A1Q9H2B4 701 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.49
RTN4-202ENST00000337526 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
RTN4-202ENST00000337526 A0A0J9YW62 118 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 AMTP48728 403 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 TNFAIP6P98066 277 aaPredicted RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 ZNF273Q14593 569 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 GFRALQ6UXV0 394 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 OVCH2Q7RTZ1 564 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 IGLV1-36A0A0B4J1U3 117 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 KLK10O43240 276 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 GATCO43716 136 aaKnown RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 CA11O75493 328 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 SLC22A18ASQ8N1D0 253 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 GPR87Q9BY21 358 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 ZNFX1Q9P2E3 1918 aaKnown RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 A0A0U1RQV5 110 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 A0A1B0GU03 582 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 RPL36A-HNRNPH2H7BZ11 118 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 NAT1P18440 290 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 GZMHP20718 246 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 TMEM50BP56557 158 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 Q5BKY6 102 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 RNASEKQ6P5S7 137 aaKnown RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 SLC35E3Q7Z769 313 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 PUSL1Q8N0Z8 303 aaKnown RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 OR10G8Q8NGN5 311 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 NPDC1Q9NQX5 325 aaPredicted RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 DOK5Q9P104 306 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms