RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 EIF4EP06730 217 aaKnown RBP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 CCL3L1P16619 93 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 METTL11BQ5VVY1 283 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 OLFML2AQ68BL7 652 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 Q71RC1 249 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 TCF23Q7RTU1 214 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 S100A16Q96FQ6 103 aaKnown RBP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 DMRTB1Q96MA1 342 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 CMTM3Q96MX0 182 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 TMPRSS13Q9BYE2 586 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 SLIRPQ9GZT3 109 aaKnown RBP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 NCOR1P1Q9H4R4 102 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 ZMAT3Q9HA38 289 aaKnown RBP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 DIABLOQ9NR28 239 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 OR6C3Q9NZP0 311 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 UBE2J1Q9Y385 318 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 AUP1Q9Y679 476 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 LINC00312Q9Y6C7 94 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 ZANQ9Y493 2812 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 TRAV18A0A075B6X5 111 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 A0A0A6YYH2 397 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 A6NJ64 397 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 MFNGO00587 321 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 CA11O75493 328 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 APOA1P02647 267 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 HIST1H1DP16402 221 aaKnown RBP11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 CDK2P24941 298 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 GLP1RP43220 463 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 CR1LQ2VPA4 569 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 CDNFQ49AH0 187 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 IZUMO1Q8IYV9 350 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 GAPTQ8N292 157 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 DTX3Q8N9I9 347 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF565Q8N9K5 539 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 OR4K15Q8NH41 348 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 MCFD2Q8NI22 146 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 CORO2AQ92828 525 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF714Q96N38 554 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 WDFY2Q96P53 400 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 CHMP1AQ9HD42 196 aaPredicted RBP11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 BATF3Q9NR55 127 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 OPN4Q9UHM6 478 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 TRAPPC2LQ9UL33 140 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 KCNK7Q9Y2U2 307 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 KPTNQ9Y664 436 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 DSCAML1Q8TD84 2053 aa11.58□□□□□ -0.56
APOBEC3B-202ENST00000335760 FAM25AB3EWG3 89 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 FAM25CB3EWG5 89 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 FAM25GB3EWG6 89 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 M0R1W7 72 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 RGS5O15539 181 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 TOX4O94842 621 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 AVPP01185 164 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF728P0DKX0 622 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 ELK1P19419 428 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 DLX6P56179 175 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF260Q3ZCT1 412 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 Q8N7P7 452 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 MRPL30Q8TCC3 161 aaKnown RBP11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 MRGPRDQ8TDS7 321 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 CMSS1Q9BQ75 279 aaKnown RBP11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 HDHD3Q9BSH5 251 aaPredicted RBP11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 PCGF1Q9BSM1 259 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 C6orf62Q9GZU0 229 aaPredicted RBP11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 SIRPDQ9H106 197 aa11.57□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF729A6NN14 1252 aaPredicted RBP11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 SERPINE3A8MV23 424 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 CTDSP2O14595 271 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 XRCC3O43542 346 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 GSTP1P09211 210 aaKnown RBP11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 CD3GP09693 182 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 MMP9P14780 707 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 ERVFRD-1P60508 538 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 MRPS15P82914 257 aaKnown RBP11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 ARFRP1Q13795 201 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 C1orf122Q6ZSJ8 110 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 VMO1Q7Z5L0 202 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 SETD6Q8TBK2 473 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 NXF2Q9GZY0 626 aaKnown RBP11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 MIXL1Q9H2W2 232 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 GAL3ST2Q9H3Q3 398 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 RIMS4Q9H426 269 aaPredicted RBP11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 TAS2R3Q9NYW6 316 aa11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 ELF5Q9UKW6 265 aaPredicted RBP11.56□□□□□ -0.56
APOBEC3B-202ENST00000335760 hCG_1809904A0A1W2PP81 198 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 A0A1W2PPE2 198 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 A0A1W2PR64 198 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 A0A1W2PRV1 198 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 TMEM235A6NFC5 223 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 C17orf98A8MV24 154 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 NAPSAO96009 420 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 CGB3P0DN86 165 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 CGB7P0DN87 165 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 GZMHP20718 246 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 TALDO1P37837 337 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 DLX1P56177 255 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 TAS2R20P59543 309 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms