RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RHEBQ15382 184 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF343Q6P1L6 599 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 GALNT14Q96FL9 552 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 OR2T2Q6IF00 324 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 BEND4Q6ZU67 534 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 HIST2H3AQ71DI3 136 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 OR5T1Q8NG75 326 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 M1APQ8TC57 530 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 BOD1Q96IK1 185 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 SF3B5Q9BWJ5 86 aaKnown RBP11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 PLEKHF2Q9H8W4 249 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 ZDHHC8Q9ULC8 765 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 RBFOX3A6NFN3 312 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 ANKRD30BLA7E2S9 258 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 TRDCB7Z8K6 153 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 YIF1AO95070 293 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 KCNE4Q8WWG9 221 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 TMEM222Q9H0R3 208 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 TCFL5Q9UL49 500 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 BOKQ9UMX3 212 aaPredicted RBP11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 DOCK11Q5JSL3 2073 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 TUSC2O75896 110 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 FABP1P07148 127 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 METTL15P1P0C7V9 234 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 SRPXP78539 464 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 CLEC12BQ2HXU8 276 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 OR8G2PQ6IF36 304 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 CYB561D1Q8N8Q1 229 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 DMBX1Q8NFW5 382 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 OR1K1Q8NGR3 316 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 OR10J5Q8NHC4 309 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 NIPSNAP3BQ9BS92 247 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 COA4Q9NYJ1 87 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 WSB1Q9Y6I7 421 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 PINLYPA6NC86 204 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF716A6NP11 495 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 CD300LBA8K4G0 201 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 CA11O75493 328 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 CA6P23280 308 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 S100A2P29034 98 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 TRAPPC2LQ9UL33 140 aa11.09□□□□□ -0.63
HMGCS1-201ENST00000325110 TRBV23-1A0A0A0MS06 115 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 RAB5CP51148 216 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF239Q16600 458 aaKnown RBP11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 SPANXN5Q5MJ07 72 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 TMEM211Q6ICI0 200 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 CCDC54Q8NEL0 328 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 RNF138Q8WVD3 245 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 PLK3Q9H4B4 646 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF552Q9H707 407 aaPredicted RBP11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 RNF150Q9ULK6 438 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 KIR2DS1A0A191URI9 304 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 H3BQ15 152 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 KIR2DS4P43632 304 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 KIR2DS1Q14954 304 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 PMS2CLQ68D20 193 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF429Q86V71 674 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 LFNGQ8NES3 379 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 C18orf12Q96KH6 178 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 RSG1Q9BU20 258 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 B4GALT7Q9UBV7 327 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 LOXL2Q9Y4K0 774 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 RPL36A-HNRNPH2H7BZ11 118 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 DKK1O94907 266 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 MDKP21741 143 aaPredicted RBP11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 APLNRP35414 380 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 MAGEA5P43359 124 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 RND3P61587 244 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 MPV17LQ2QL34 196 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 GGNQ86UU5 652 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 TMEM171Q8WVE6 324 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 GINS3Q9BRX5 216 aa11.08□□□□□ -0.64
HMGCS1-201ENST00000325110 LOC102723996A0A087X1L8 192 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 RAB39BQ96DA2 213 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 UNKLQ9H9P5 680 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 CACNG5Q9UF02 275 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 MIOXQ9UGB7 285 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 PILRBQ9UKJ0 227 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 SLC22A20A6NK97 555 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 CYB5BO43169 146 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 CDS2O95674 445 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 PSG2P11465 335 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 HIST1H3AP68431 136 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 HIST2H3PS2Q5TEC6 136 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 CT55Q8WUE5 264 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 GLRX2Q9NS18 164 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 COL6A3P12111 3177 aa11.07□□□□□ -0.64
HMGCS1-201ENST00000325110 GRPP07492 148 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 VDAC1P21796 283 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 LTC4SQ16873 150 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms