RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 MEIS3P1A6NDR6 274 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 CCL2P13500 99 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 S100A1P23297 94 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 SSX2Q16385 188 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 SEZ6L2Q6UXD5 910 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 OR10Z1Q8NGY1 313 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 ORAI1Q96D31 301 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 SNRNP40Q96DI7 357 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 SUCNR1Q9BXA5 334 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 WIPI2Q9Y4P8 454 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 SPTBN2O15020 2390 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 SPRY1O43609 319 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 MMP7P09237 267 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 ID1P41134 155 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 CD83Q01151 205 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 CXorf66Q5JRM2 361 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 DHRS7BQ6IAN0 325 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 C9orf106Q8NAJ2 232 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 OR4C13Q8NGP0 309 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 OR51H1Q8NH63 302 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 PLSCR2Q9NRY7 297 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 M0R036 132 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 PMP2P02689 132 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 AVPI1Q5T686 147 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 RBMXL1Q96E39 390 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 PRELID1Q9Y255 219 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 ADAM10O14672 748 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 TXNL1O43396 289 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 HLA-AP01891 365 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 S100A9P06702 114 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 SLC25A16P16260 332 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ADRA2CP18825 462 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 DUSP1P28562 367 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 FGF12P61328 243 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR4S2Q8NH73 311 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 CA7P43166 264 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 MRPS11P82912 194 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 IL24Q13007 206 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF79Q15937 498 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 BATF2Q8N1L9 274 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR10S1Q8NGN2 331 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 GIMAP1Q8WWP7 306 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF486Q96H40 463 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR4C12Q96R67 309 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 TMEM208Q9BTX3 173 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 PECRQ9BY49 303 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 CEP250Q9BV73 2442 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 MELTFP08582 738 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 CD40P25942 277 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 UBE2G2P60604 165 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 RPL31P62899 125 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR10K2Q6IF99 312 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 SSX9Q7RTT3 188 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 PRSS45Q7RTY3 260 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 FAM90A1Q86YD7 464 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR51S1Q8NGJ8 323 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR4C16Q8NGL9 310 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 LILRB1Q8NHL6 650 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 HPSE2Q8WWQ2 592 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 SPACA5Q96QH8 159 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 RSRP1Q9BUV0 290 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 TRAF4Q9BUZ4 470 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 BIN3Q9NQY0 253 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF318Q5VUA4 2279 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ZFP92A6NM28 416 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 LANCL1O43813 399 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 S100A6P06703 90 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 HOXB5P09067 269 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 GIPP09681 153 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 CCL8P80075 99 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 VAX1Q5SQQ9 334 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ELP2Q6IA86 826 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 LAMTOR1Q6IAA8 161 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF788Q6ZQV5 615 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 GTF3AQ92664 365 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 MARS2Q96GW9 593 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 TM2D1Q9BX74 207 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 TIMM9Q9Y5J7 89 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 CUL9Q8IWT3 2517 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 KIF26BQ2KJY2 2108 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 RAB27BO00194 218 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 TGFAP01135 160 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 HBE1P02100 147 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 CEACAM6P40199 344 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF266Q14584 549 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 PHYHD1Q5SRE7 291 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 FAM166AQ6J272 317 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR5AP2Q8NGF4 316 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR4X2Q8NGF9 303 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 OR2V2Q96R30 315 aa7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 EIF5A2Q9GZV4 153 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 ZFHX2Q9C0A1 2572 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-201ENST00000317968 XKRY2A2RUG3 117 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 CD3DP04234 171 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 COX5AP20674 150 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 CD80P33681 288 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 HOGA1Q86XE5 327 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 OR10V1Q8NGI7 309 aa7.35□□□□□ -1.23
PDLIM5-201ENST00000317968 OR2T35Q8NGX2 323 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms